ATF 1.0 34 67 "Type=GenePix Results 3" "DateTime=2003/06/06 11:03:47" "Settings=" "GalFile=F:\GIPO-GAL files\GAL files\Chip GAL files for analyzing chips with GenePix\new S pneumo GAL for genepix v4.1 MIAME.gal" "PixelSize=10" "Wavelengths=635 532" "ImageFiles=H:\ExperimentSets\12462818.tif 2 H:\ExperimentSets\12462818.tif 3" "NormalizationMethod=None" "NormalizationFactors=1 1" "JpegImage=G:\to_be\12462818.jpg" "StdDev=Type 1" "RatioFormulations=W1/W2 (635/532)" "Barcode=" "BackgroundSubtraction=LocalFeature" "ImageOrigin=2520, 2640" "JpegOrigin=2570, 2780" "Creator=GenePix Pro 4.1.1.28" "Scanner=GenePix 4000B [84596]" "FocusPosition=0" "NormalizationFactor:RatioOfMedians=0.688899311290034" "NormalizationFactor:RatioOfMeans=0.713750060559577" "NormalizationFactor:MedianOfRatios=0.703607163877908" "NormalizationFactor:MeanOfRatios=0.684288457350668" "NormalizationFactor:RegressionRatio=0.715147783819576" "Temperature=37.9238" "LinesAveraged=1" "Comment=originally scanned in v4.1, 06-06-02, tuomanen" "PMTGain=850 740" "ScanPower=100 100" "LaserPower=3.36436 3.80108" "LaserOnTime=64623 47197" "Filters= " "ScanRegion=252,264,2048,5684" "Supplier=" "Index" "Block" "Column" "Row" "Name" "ID" "X" "Y" "Dia." "F635 Median" "F635 Mean" "F635 SD" "B635 Median" "B635 Mean" "B635 SD" "% > B635+1SD" "% > B635+2SD" "F635 % Sat." "F532 Median" "F532 Mean" "F532 SD" "B532 Median" "B532 Mean" "B532 SD" "% > B532+1SD" "% > B532+2SD" "F532 % Sat." "Ratio of Medians (635/532)" "Ratio of Means (635/532)" "Median of Ratios (635/532)" "Mean of Ratios (635/532)" "Ratios SD (635/532)" "Rgn Ratio (635/532)" "Rgn Rē (635/532)" "F Pixels" "B Pixels" "Sum of Medians" "Sum of Means" "Log Ratio (635/532)" "F635 Median - B635" "F532 Median - B532" "F635 Mean - B635" "F532 Mean - B532" "F635 Total Intensity" "F532 Total Intensity" "SNR 635" "SNR 532" "Flags" "Normalize" "subrow" "subcolumn" "entire array column" "entire array row" "meta row" "meta column" "feature name" "strain" "well id" "amplified" "verified" "size" "Norm Ratio of Medians" "Norm Ratio of Means" "Norm Median of Ratios" "Norm Mean of Ratios" "Norm Rgn Ratio" "Norm Flag" 1 1 1 1 "type II restriction endonuclease, putative" "SP1037" 2890 3140 110 2151 2161 609 434 465 225 100 100 0 2837 2796 790 456 479 157 100 100 0 0.721 0.738 0.749 0.731 1.600 0.714 0.639 80 656 4098 4067 -0.472 1717 2381 1727 2340 172917 223716 7.538 14.758 0 0 1 1 1 1 1 1 ORF01124 TIGR4 9420 1 0 100 0.496696403440114 0.526747544692967 0.527001765744553 0.500214862323338 0.510615517647177 "YES" 2 1 2 1 "hypothetical protein" "SP0367" 3140 3140 110 1700 1762 440 421 477 269 100 100 0 1180 1198 457 449 469 166 92 81 0 1.750 1.790 2.122 2.092 2.314 2.073 0.387 80 656 2010 2090 0.807 1279 731 1341 749 140987 95813 4.777 4.392 0 0 1 2 2 1 1 1 ORF00311 TIGR4 8756 1 0 100 1.20557379475756 1.27761260840164 1.49305440174892 1.4315314527776 1.48250135585798 "YES" 3 1 3 1 "ribosomal protein L35" "SP0960" 3410 3140 110 17391 16494 4399 438 549 471 100 100 0 31327 30288 5895 489 615 641 100 100 0 0.550 0.539 0.539 0.523 1.360 0.538 0.922 80 656 47791 45855 -0.863 16953 30838 16056 29799 1319515 2423001 33.854 46.292 0 0 1 3 3 1 1 1 ORF01035 TIGR4 9344 1 0 103 0.378894621209519 0.384711282641612 0.379244261330192 0.357882863194399 0.384749507694932 "YES" 4 1 4 1 "IS630-Spn1, transposase Orf1" "SP0299" 3660 3140 110 24061 23006 7131 450 679 1053 100 100 0 15917 15090 4002 500 616 527 100 100 0 1.531 1.546 1.544 1.508 1.443 1.574 0.924 80 656 39028 37146 0.615 23611 15417 22556 14590 1840486 1207238 21.203 27.465 0 0 1 4 4 1 1 1 ORF00234 TIGR4 8690 1 0 104 1.05470484558504 1.10345759362511 1.08636946102749 1.03190699368481 1.12564261173201 "YES" 5 1 5 1 "hypothetical protein" "SP2005" 3930 3140 120 11502 10673 4200 418 476 296 100 99 0 1228 1251 448 478 511 201 92 80 0 14.779 13.266 13.536 12.590 2.221 15.992 0.497 120 820 11834 11028 3.885 11084 750 10255 773 1280717 150085 34.449 3.682 0 0 1 5 5 1 1 1 ORF02292 TIGR4 10381 1 0 125 10.1812429215554 9.46860830338334 9.52402657025136 8.6151916780449 11.4366433588427 "YES" 6 1 6 1 "bacteriocin BlpM" "SP0539" 4190 3140 120 1692 1653 483 409 448 251 100 94 0 928 1005 434 461 474 159 87 71 0 2.747 2.287 2.542 2.623 2.431 2.409 0.314 120 820 1750 1788 1.458 1283 467 1244 544 198320 120564 4.801 3.340 0 0 1 6 6 1 1 1 ORF00519 TIGR4 8927 0 0 134 1.89240640811372 1.63234638849975 1.78856941057764 1.7948886236308 1.72279101122136 "YES" 7 1 7 1 "hypothetical protein" "SP0142" 4450 3140 120 5688 5239 1948 426 458 239 99 99 0 3667 3455 1509 452 464 146 99 99 0 1.637 1.603 1.658 1.695 1.814 1.577 0.814 120 820 8477 7816 0.711 5262 3215 4813 3003 628636 414565 20.004 20.486 0 0 1 7 7 1 1 1 ORF00046 TIGR4 8533 1 1 145 1.12772817258179 1.144141347077 1.16658067770957 1.15986893520938 1.12778805508347 "YES" 8 1 1 2 "hypothetical protein" "SP0125" 2890 3400 140 1247 1287 477 424 458 230 92 79 0 853 906 407 440 459 150 74 63 0 1.993 1.852 1.859 1.893 2.660 2.183 0.252 156 1068 1236 1329 0.995 823 413 863 466 200695 141335 3.604 2.980 0 0 2 1 1 2 1 1 ORF00028 TIGR4 8517 1 0 159 1.37297632740104 1.32186511215634 1.30800571764903 1.29535804976481 1.56116761207813 "YES" 9 1 2 2 "hypothetical protein" "SP1455" 3150 3410 120 3311 3271 1168 404 443 241 100 100 0 2386 2431 928 438 463 169 95 95 0 1.492 1.439 1.414 1.626 2.050 1.416 0.760 120 814 4855 4860 0.578 2907 1948 2867 1993 392511 291766 11.734 11.645 0 0 2 2 2 2 1 1 ORF01626 TIGR4 9835 1 0 100 1.02783777244473 1.02708633714523 0.994900529723362 1.11265303165219 1.01264926188852 "YES" 10 1 3 2 "hypothetical protein" "SP0147" 3400 3400 110 2546 2478 683 427 460 273 100 97 0 1785 1825 575 461 487 173 100 95 0 1.600 1.504 1.504 1.562 1.882 1.714 0.609 80 656 3443 3415 0.678 2119 1324 2051 1364 198255 145986 7.392 7.734 0 0 2 3 3 2 1 1 ORF00053 TIGR4 8538 1 0 101 1.10223889806405 1.0734800910816 1.05822517447237 1.06885857038174 1.22576330146675 "YES" 11 1 4 2 "hypothetical protein" "SP1209" 3680 3400 130 1698 1765 613 421 454 239 100 95 0 1213 1323 572 466 487 154 94 86 0 1.710 1.568 1.696 1.761 2.250 1.704 0.450 120 934 2024 2201 0.774 1277 747 1344 857 211811 158793 5.485 5.429 0 0 2 4 4 2 1 1 ORF01323 TIGR4 9591 1 0 103 1.17801782230596 1.11916009495742 1.19331774993693 1.20503197339453 1.21861182362856 "YES" 12 1 5 2 "hypothetical protein" "SP0003" 3930 3400 110 2721 2836 740 439 496 285 100 100 0 2726 2805 766 464 493 165 98 98 0 1.009 1.024 1.031 1.041 1.544 1.029 0.710 80 656 4544 4738 0.013 2282 2262 2397 2341 226892 224368 8.211 14.012 0 0 2 5 5 2 1 1 ORF02594 TIGR4 10615 1 0 105 0.695099405091644 0.730880062013006 0.725418985958123 0.712344284102045 0.735887069550344 "YES" 13 1 6 2 "IS3-Spn1, hypothetical protein, authentic point mutation" "SP0393" 4190 3400 130 1937 1953 597 438 474 261 98 97 0 1352 1436 684 447 466 157 95 93 0 1.656 1.532 1.679 1.734 2.159 1.467 0.495 120 934 2404 2504 0.728 1499 905 1515 989 234336 172350 5.667 6.178 0 0 2 6 6 2 1 1 ORF00342 TIGR4 8782 1 0 128 1.1408172594963 1.09346509277727 1.18135642815101 1.18655618504606 1.04912179886332 "YES" 14 1 7 2 "hypothetical protein" "SP0997" 4450 3400 110 2562 2579 691 417 446 231 100 100 0 1537 1594 498 445 456 146 98 97 0 1.964 1.882 1.998 1.933 1.599 1.990 0.649 80 656 3237 3311 0.974 2145 1092 2162 1149 206305 127543 9.234 7.795 0 0 2 7 7 2 1 1 ORF01079 TIGR4 9380 1 0 138 1.35299824737363 1.34327761397312 1.40580711342806 1.32272958805884 1.42314408980096 "YES" 15 1 1 3 "hypothetical protein" "SP0772" 2890 3670 110 2429 2363 628 409 448 232 100 98 0 1430 1519 607 445 466 161 96 93 0 2.051 1.819 1.926 2.003 1.862 1.771 0.582 80 656 3005 3028 1.036 2020 985 1954 1074 189053 121498 8.254 6.540 0 0 3 1 1 3 1 1 ORF00803 TIGR4 9157 1 0 146 1.41293248745586 1.29831136015787 1.35514739762885 1.37062978007339 1.26652672514447 "YES" 16 1 2 3 "hypothetical protein" "SP1146" 3150 3660 110 4321 4280 1273 416 451 245 100 98 0 5563 5502 1611 434 466 186 100 100 0 0.761 0.762 0.756 0.745 1.431 0.766 0.862 80 656 9034 8932 -0.393 3905 5129 3864 5068 342414 440135 15.629 27.075 0 0 3 2 2 3 1 1 ORF01249 TIGR4 9528 1 0 162 0.524252375891716 0.543877546146397 0.531927015891698 0.509794900726247 0.547803202405795 "YES" 17 1 3 3 "conserved hypothetical protein" "SP0783" 3420 3670 110 13676 13634 2253 401 487 410 100 100 0 4068 3963 1060 461 497 254 100 97 0 3.680 3.779 3.816 3.994 1.430 3.711 0.874 80 656 16882 16735 1.880 13275 3607 13233 3502 1090731 317074 32.066 13.646 0 0 3 3 3 3 1 1 ORF00816 TIGR4 9168 1 0 252 2.53514946554732 2.69726147885464 2.6849649373581 2.73304809865857 2.65391342575445 "YES" 18 1 4 3 "conserved hypothetical protein" "SP0471" 3670 3660 110 4807 4798 1206 407 453 270 100 100 0 3455 3489 1291 460 496 217 100 100 0 1.469 1.450 1.425 1.505 1.528 1.409 0.747 80 656 7395 7420 0.555 4400 2995 4391 3029 383868 279123 16.093 13.793 0 0 3 4 4 3 1 1 ORF00439 TIGR4 8860 1 1 253 1.01199308828506 1.03493758781139 1.00264020852602 1.02985412831275 1.00764322740178 "YES" 19 1 5 3 "preprotein translocase, YajC subunit" "SP2029" 3930 3660 110 19354 19178 4540 406 502 427 100 100 0 16217 15869 3214 470 523 296 100 100 0 1.203 1.219 1.256 1.190 1.304 1.257 0.929 80 656 34695 34171 0.267 18948 15747 18772 15399 1534202 1269558 43.738 51.845 0 0 3 5 5 3 1 1 ORF02321 TIGR4 10404 1 1 254 0.828745871481911 0.870061323822124 0.883730597830652 0.814303264247294 0.898940764261207 "YES" 20 1 6 3 "conserved hypothetical protein" "SP1106" 4180 3660 110 21434 20739 5513 413 641 1304 100 98 0 26413 26356 5954 451 636 1059 100 100 0 0.810 0.785 0.788 0.753 1.378 0.792 0.928 80 656 46983 46231 -0.305 21021 25962 20326 25905 1659092 2108518 15.413 24.287 0 0 3 6 6 3 1 1 ORF01202 TIGR4 9488 1 1 256 0.558008442144927 0.560293797539268 0.554442445135791 0.515269208385053 0.566397044785104 "YES" 21 1 7 3 "ribosomal protein L22" "SP0214" 4440 3660 110 17451 16677 4839 421 605 931 100 97 0 21329 20494 4689 442 565 686 100 100 0 0.815 0.811 0.821 0.772 1.400 0.827 0.924 80 656 37917 36308 -0.295 17030 20887 16256 20052 1334177 1639505 17.263 29.051 0 0 3 7 7 3 1 1 ORF00130 TIGR4 8605 1 1 266 0.561452938701377 0.578851299113817 0.577661481543762 0.528270689074715 0.59142721721879 "YES" 22 1 1 4 "ABC transporter, substrate-binding protein" "SP1690" 2900 3930 110 2666 2602 728 409 438 233 100 100 0 1164 1215 448 429 450 149 95 87 0 3.071 2.790 2.963 3.107 1.997 2.944 0.553 80 656 2992 2979 1.619 2257 735 2193 786 208162 97185 9.288 5.134 0 0 4 1 1 4 1 1 ORF01909 TIGR4 10069 1 1 268 2.11560978497169 1.99136266896122 2.08478802657024 2.12608423698852 2.10539507556483 "YES" 23 1 2 4 "phospho-2-dehydro-3-deoxyheptonate aldolase" "SP1700" 3160 3920 110 13966 13389 3573 388 445 304 100 100 0 15268 15246 2710 432 479 249 100 100 0 0.915 0.878 0.874 0.838 1.387 0.905 0.906 80 656 28414 27815 -0.128 13578 14836 13001 14814 1071106 1219666 42.579 59.305 0 0 4 2 2 4 1 1 ORF01923 TIGR4 10079 1 1 270 0.630342869830381 0.626672553171308 0.614952661229291 0.573433727259859 0.647208744356716 "YES" 24 1 3 4 "ribosome-binding factor A" "SP0557" 3410 3920 110 5014 4999 1269 387 440 262 100 100 0 5493 5558 1229 456 480 182 100 100 0 0.919 0.904 0.926 0.885 1.385 0.935 0.836 80 656 9664 9714 -0.122 4627 5037 4612 5102 399935 444635 17.401 27.901 0 0 4 3 3 4 1 1 ORF00540 TIGR4 8943 1 1 273 0.633098467075541 0.645230054745857 0.651540233750943 0.605595284755341 0.668663177871304 "YES" 25 1 4 4 "DNA-binding response regulator" "SP0661" 3670 3920 110 8684 8506 2077 408 461 316 100 100 0 4784 4730 1048 453 480 170 100 100 0 1.911 1.893 1.892 1.855 1.432 1.988 0.874 80 656 12607 12375 0.934 8276 4331 8098 4277 680511 378426 25.459 25.000 0 0 4 4 4 4 1 1 ORF00675 TIGR4 9046 1 1 252 1.31648658387525 1.35112886463928 1.331224754057 1.26935508838549 1.42171379423332 "YES" 26 1 5 4 "acylphosphatase" "SP1974" 3930 3920 110 2770 2755 750 383 416 216 100 100 0 1428 1561 590 445 466 149 100 98 0 2.428 2.125 2.104 2.274 1.807 2.245 0.558 80 656 3370 3488 1.280 2387 983 2372 1116 220368 124860 10.829 7.349 0 0 4 5 5 4 1 1 ORF02256 TIGR4 10350 1 1 253 1.6726475278122 1.5167188786891 1.48038947279912 1.55607195201542 1.60550677467495 "YES" 27 1 6 4 "sodium:solute symporter family protein" "SP1328" 4190 3920 110 1510 1565 439 380 409 210 100 98 0 856 904 372 437 455 151 80 63 0 2.697 2.537 2.450 2.786 2.693 2.808 0.275 80 656 1549 1652 1.431 1130 419 1185 467 125200 72318 5.505 2.974 0 0 4 6 6 4 1 1 ORF01464 TIGR4 9709 1 1 255 1.85796144254922 1.81078390363965 1.72383755150087 1.90642764217896 2.00813497696537 "YES" 28 1 7 4 "transcriptional regulator, GntR family" "SP1714" 4450 3920 110 16035 15704 4293 390 462 328 100 100 0 2411 2513 660 434 445 149 100 100 0 7.914 7.366 7.609 7.439 1.463 8.258 0.789 80 656 17622 17393 2.984 15645 1977 15314 2079 1256312 201005 46.470 13.879 0 0 4 7 7 4 1 1 ORF01937 TIGR4 10093 1 1 257 5.45194914954933 5.25748294608184 5.353746909947 5.09042183423162 5.90569039878206 "YES" 29 1 1 5 "conserved hypothetical protein" "SP2209" 2900 4180 110 12191 11833 2848 411 467 335 100 100 0 7655 7657 1884 445 467 237 100 100 0 1.634 1.584 1.570 1.564 1.416 1.614 0.863 80 656 18990 18634 0.708 11780 7210 11422 7212 946664 612593 33.928 30.338 0 0 5 1 1 5 1 1 ORF02556 TIGR4 10581 1 1 267 1.12566147464792 1.13058009592637 1.10466324728832 1.07022714729644 1.1542485230848 "YES" 30 1 2 5 "conserved hypothetical protein" "SP1750" 3150 4180 110 20399 19663 4135 389 483 414 100 100 0 17324 17133 3084 428 486 264 100 100 0 1.184 1.154 1.183 1.133 1.303 1.179 0.899 80 656 36906 35979 0.244 20010 16896 19274 16705 1573025 1370625 46.329 63.057 0 0 5 2 2 5 1 1 ORF01983 TIGR4 10128 1 1 268 0.8156567845674 0.823667569885751 0.832367274867565 0.775298822178306 0.84315923712328 "YES" 31 1 3 5 "transcription-repair coupling factor" "SP0006" 3410 4180 110 8442 8169 1820 379 434 265 100 100 0 13300 13088 2407 463 504 233 100 100 0 0.628 0.617 0.587 0.610 1.297 0.621 0.860 80 656 20900 20415 -0.671 8063 12837 7790 12625 653538 1047018 29.189 54.009 0 0 5 3 3 5 1 1 ORF02597 TIGR4 10618 1 1 271 0.432628767490141 0.440383787365259 0.413017405196332 0.417415958983907 0.444106773751957 "YES" 32 1 4 5 "ribosomal protein L13" "SP0294" 3670 4180 110 19736 19922 5026 398 470 365 100 100 0 36494 37753 8639 459 542 385 100 100 0 0.537 0.524 0.516 0.515 1.186 0.530 0.934 80 656 55373 56818 -0.898 19338 36035 19524 37294 1593746 3020258 53.293 96.652 0 0 5 4 4 5 1 1 ORF00229 TIGR4 8685 1 1 274 0.369938930162748 0.374005031733218 0.363061296561 0.352408555535594 0.379028325424375 "YES" 33 1 5 5 "autoinducer-2 production protein" "SP0340" 3920 4180 110 9952 9737 2439 403 499 556 100 100 0 9530 9618 1872 451 520 363 100 100 0 1.052 1.018 1.032 0.991 1.245 1.033 0.928 80 656 18628 18501 0.073 9549 9079 9334 9167 778994 769435 16.615 25.063 0 0 5 5 5 5 1 1 ORF00280 TIGR4 8729 1 1 285 0.724722075477116 0.726597561649649 0.726122593122001 0.678129861234512 0.738747660685622 "YES" 34 1 6 5 "adenine phosphoribosyltransferase" "SP1577" 4190 4180 110 13422 13200 2607 404 468 319 100 100 0 13916 13986 2254 454 507 403 100 100 0 0.967 0.946 0.957 0.935 1.248 0.935 0.905 80 656 26480 26328 -0.048 13018 13462 12796 13532 1056028 1118917 39.912 33.447 0 0 5 6 6 5 1 1 ORF01774 TIGR4 9957 1 1 287 0.666165634017463 0.675207557289359 0.673352055831158 0.639809707622874 0.668663177871304 "YES" 35 1 7 5 "hypothetical protein" "SP0781" 4450 4180 110 12458 12557 2576 394 454 305 100 100 0 9550 9456 1495 436 464 181 100 100 0 1.324 1.348 1.369 1.328 1.280 1.398 0.909 80 656 21178 21183 0.405 12064 9114 12163 9020 1004579 756490 39.682 49.680 0 0 5 7 7 5 1 1 ORF00813 TIGR4 9166 1 1 290 0.912102688148005 0.962135081634309 0.963238207348856 0.908735071361687 0.999776601779767 "YES" 36 1 1 6 "pyruvate kinase" "SP0897" 2890 4440 130 57808 49614 19833 348 401 303 99 98 20 65535 56919 18663 456 501 362 100 100 71 0.883 0.873 0.911 0.802 1.574 0.881 0.916 120 940 122539 105729 -0.180 57460 65079 49266 56463 5953714 6830230 162.419 155.851 0 0 6 1 1 6 1 1 ORF00957 TIGR4 9281 1 1 293 0.6082980918691 0.62310380286851 0.640986126292774 0.548799342795235 0.630045197545047 "YES" 37 1 2 6 "O-antigen transporter RfbX, putative" "SP0356" 3160 4440 130 46373 40849 20871 349 396 288 100 100 14 65535 55736 19805 429 483 369 100 100 70 0.707 0.732 0.762 0.655 1.736 0.745 0.842 120 934 111130 95807 -0.500 46024 65106 40500 55307 4901857 6688293 140.462 149.737 0 0 6 2 2 6 1 1 ORF00298 TIGR4 8745 1 1 308 0.487051813082054 0.52246504432961 0.536148658874966 0.448208939564687 0.532785098945584 "YES" 38 1 3 6 "potassium uptake protein, Trk family" "SP0078" 3410 4440 100 26389 25906 6529 363 432 329 100 100 0 16724 17214 4586 463 507 233 100 100 0 1.601 1.525 1.535 1.534 1.253 1.528 0.945 80 560 42287 42294 0.679 26026 16261 25543 16751 2072466 1377108 77.429 71.704 0 0 6 3 3 6 1 1 ORF02688 TIGR4 10688 1 1 312 1.10292779737534 1.08846884235335 1.08003699655259 1.04969849357592 1.09274581367631 "YES" 39 1 4 6 "IS1381, transposase OrfA, authentic frameshift" "SP1085" 3660 4440 110 21588 21183 7087 369 461 475 100 100 0 16596 16353 4506 456 489 228 100 100 0 1.315 1.309 1.308 1.262 1.335 1.341 0.950 80 656 37359 36711 0.395 21219 16140 20814 15897 1694633 1308278 43.625 69.579 0 0 6 4 4 6 1 1 ORF01175 TIGR4 9467 1 0 316 0.905902594346394 0.934298829272486 0.920318170352303 0.863572033176543 0.959013178102052 "YES" 40 1 5 6 "MutT/nudix family protein" "SP0740" 3930 4440 120 11809 11636 5704 371 423 647 96 95 0 12226 12051 5270 445 470 159 100 99 0 0.971 0.971 0.982 0.932 1.528 0.994 0.955 120 820 23219 22871 -0.043 11438 11781 11265 11606 1396344 1446085 17.331 72.836 0 0 6 5 5 6 1 1 ORF00765 TIGR4 9125 1 0 319 0.668921231262623 0.693051308803349 0.690942234928105 0.637756842250822 0.710856897116659 "YES" 41 1 6 6 "conserved hypothetical protein" "SP0434" 4180 4440 110 5717 5895 1556 368 442 723 100 98 0 6483 6565 1495 443 486 206 100 100 0 0.886 0.903 0.897 0.890 1.360 0.919 0.884 80 656 11389 11649 -0.175 5349 6040 5527 6122 471608 525225 7.542 29.510 0 0 6 6 6 6 1 1 ORF00389 TIGR4 8823 1 1 286 0.61036478980297 0.644516304685298 0.631135625998483 0.609016727042094 0.657220813330191 "YES" 42 1 7 6 "conserved hypothetical protein" "SP0909" 4450 4440 120 16925 15503 5883 360 400 225 99 99 0 18153 16296 5857 435 454 149 100 100 0 0.935 0.955 0.966 0.937 1.674 0.960 0.939 120 820 34283 31004 -0.097 16565 17718 15143 15861 1860385 1955511 67.124 106.322 0 0 6 7 7 6 1 1 ORF00974 TIGR4 9293 1 1 288 0.644120856056182 0.681631307834396 0.679684520306059 0.641178284537576 0.686541872466793 "YES" 43 1 1 7 "conserved hypothetical protein" "SP0721" 2900 4700 110 2226 2293 613 339 372 215 100 98 0 1630 1643 515 451 525 1270 45 2 0 1.601 1.639 1.662 1.732 1.796 0.217 0.104 80 656 3066 3146 0.679 1887 1179 1954 1192 183469 131440 8.935 0.880 0 0 7 1 1 7 1 1 ORF00741 TIGR4 9106 1 1 291 1.10292779737534 1.16983634925715 1.16939510636508 1.18518760813136 0.155187069088848 "YES" 44 1 2 7 "v-type sodium ATP synthase, subunit C" "SP1319" 3150 4700 100 1585 1613 531 322 353 184 98 97 0 1258 1303 473 430 444 135 97 91 0 1.525 1.479 1.436 1.587 2.360 1.490 0.439 80 560 2091 2164 0.609 1263 828 1291 873 129061 104225 6.848 6.363 0 0 7 2 2 7 1 1 ORF01454 TIGR4 9700 1 1 294 1.0505714497173 1.05563633956761 1.01037988732868 1.08596578181551 1.06557019789117 "YES" 45 1 3 7 "MutT/nudix family protein" "SP1235" 3410 4700 110 7672 7410 2077 311 356 222 100 100 0 5708 5757 1638 469 493 251 100 100 0 1.405 1.342 1.404 1.330 1.368 1.335 0.906 80 656 12600 12387 0.491 7361 5239 7099 5288 592793 460584 31.775 20.972 0 0 7 3 3 7 1 1 ORF01353 TIGR4 9617 1 1 309 0.967903532362497 0.957852581270952 0.987864458084582 0.910103648276388 0.954722291399134 "YES" 46 1 4 7 "rod shpae-determining protein MreD, putative" "SP2217" 3670 4700 110 14703 14106 4834 339 387 276 100 100 0 19920 20117 6123 454 496 267 100 100 0 0.738 0.700 0.704 0.687 1.251 0.705 0.949 80 656 33830 33430 -0.438 14364 19466 13767 19663 1128479 1609329 49.707 73.487 0 0 7 4 4 7 1 1 ORF02566 TIGR4 10589 1 1 313 0.508407691732045 0.499625042391704 0.495339443370047 0.470106170199909 0.504179187592801 "YES" 47 1 5 7 "choline transporter" "SP1860" 3930 4700 110 30803 30633 9687 316 414 414 100 100 0 19861 19935 5834 452 492 224 100 100 0 1.571 1.556 1.527 1.535 1.292 1.597 0.939 80 656 49896 49800 0.651 30487 19409 30317 19483 2450655 1594762 72.993 86.799 0 0 7 5 5 7 1 1 ORF02118 TIGR4 10236 1 1 317 1.08226081803664 1.1105950942307 1.07440813924157 1.05038278203327 1.14209101075986 "YES" 48 1 6 7 "single-strand binding protein" "SP1540" 4190 4700 110 8699 8967 3382 334 369 237 100 100 0 10734 10770 3662 435 465 253 100 100 0 0.812 0.835 0.807 0.827 1.354 0.859 0.908 80 656 18664 18968 -0.300 8365 10299 8633 10335 717349 861583 36.278 40.731 0 0 7 6 6 7 1 1 ORF01727 TIGR4 9920 1 1 321 0.559386240767507 0.595981300567246 0.567810981249472 0.565906554229002 0.614311946301016 "YES" 49 1 7 7 "S-adenosylmethionine synthetase" "SP0762" 4450 4700 110 42228 42219 12876 337 447 476 100 100 0 28507 27662 8211 425 487 287 100 100 0 1.492 1.538 1.556 1.552 1.204 1.565 0.962 80 656 69973 69119 0.577 41891 28082 41882 27237 3377537 2212987 87.756 94.686 0 0 7 7 7 7 1 1 ORF00793 TIGR4 9147 1 1 341 1.02783777244473 1.09774759314063 1.09481274699402 1.06201568580824 1.11920628167764 "YES" 50 1 1 8 "IS1167, transposase, interruption" "SP1905" 2890 4960 110 9729 9518 3120 318 367 293 100 100 0 11975 11919 3633 439 471 183 100 100 0 0.816 0.801 0.794 0.773 1.410 0.805 0.927 80 656 20947 20680 -0.294 9411 11536 9200 11480 761457 953544 31.232 62.557 0 0 8 1 1 8 1 1 ORF02173 TIGR4 10281 1 1 345 0.562141838012667 0.571713798508221 0.558664088119059 0.528954977532066 0.575693965974759 "YES" 51 1 2 8 "conserved hypothetical protein" "SP1069" 3150 4960 110 8811 8497 2846 313 352 228 100 100 0 15318 14909 4413 437 467 203 100 100 0 0.571 0.566 0.564 0.552 1.350 0.564 0.921 80 656 23379 22656 -0.808 8498 14881 8184 14472 679785 1192741 35.724 71.143 0 0 8 2 2 8 1 1 ORF01158 TIGR4 9451 1 1 349 0.393361506746609 0.40398253427672 0.39683444042714 0.377727228457569 0.403343350074241 "YES" 52 1 3 8 "type II DNA modification methyltransferase, putative" "SP1431" 3410 4960 110 11120 10763 3618 326 376 375 100 100 0 8467 8697 3165 472 487 173 100 100 0 1.350 1.269 1.314 1.277 1.451 1.276 0.893 80 656 18789 18662 0.433 10794 7995 10437 8225 861065 695723 27.699 47.457 0 0 8 3 3 8 1 1 ORF01597 TIGR4 9811 1 1 355 0.930014070241546 0.905748826850103 0.924539813335571 0.873836360036802 0.912528572153779 "YES" 53 1 4 8 "conserved hypothetical protein TIGR00045" "SP1126" 3670 4960 110 2738 2853 1017 310 347 196 100 100 0 3064 3089 892 444 461 162 100 100 0 0.927 0.961 0.962 0.938 1.432 0.962 0.779 80 656 5048 5188 -0.110 2428 2620 2543 2645 228229 247107 12.786 16.222 0 0 8 4 4 8 1 1 ORF01225 TIGR4 9508 1 1 379 0.638609661565861 0.685913808197753 0.676870091650547 0.641862572994926 0.687972168034432 "YES" 54 1 5 8 "transcriptional regulator, biotin repressor family" "SP1234" 3930 4960 110 18975 17682 6283 315 369 270 100 100 0 14557 13959 4424 437 474 213 100 100 0 1.322 1.284 1.285 1.254 1.349 1.318 0.928 80 656 32780 30889 0.402 18660 14120 17367 13522 1414569 1116727 64.122 63.310 0 0 8 5 5 8 1 1 ORF01352 TIGR4 9616 1 1 386 0.910724889525425 0.916455077758496 0.904135205583111 0.858097725517737 0.942564779074202 "YES" 55 1 6 8 "ABC transporter, ATP-binding protein" "SP2196" 4190 4960 100 5120 5125 1600 318 356 214 100 100 0 6112 6036 1694 412 436 132 100 100 0 0.842 0.855 0.839 0.849 1.369 0.837 0.866 80 560 10502 10431 -0.247 4802 5700 4807 5624 409981 482899 22.285 42.424 0 0 8 6 6 8 1 1 ORF02542 TIGR4 10568 1 1 393 0.580053220106208 0.610256301778438 0.590326410493565 0.580960900290717 0.598578695056985 "YES" 56 1 7 8 "ribosomal protein L2" "SP0212" 4450 4960 110 19516 19636 6114 331 390 257 100 100 0 25511 24913 7023 416 456 208 100 100 0 0.764 0.788 0.812 0.784 1.307 0.789 0.926 80 656 44280 43802 -0.387 19185 25095 19305 24497 1570875 1993019 74.887 117.582 0 0 8 7 7 8 1 1 ORF00127 TIGR4 8603 1 1 398 0.526319073825586 0.562435047720946 0.571329017068861 0.536482150562923 0.564251601433646 "YES" 57 1 1 9 "ATP synthase F1, delta subunit" "SP1511" 2890 5220 110 65535 58977 11235 334 751 2098 100 100 57 63795 55168 13470 442 677 1131 100 100 45 1.029 1.072 1.002 1.087 1.252 1.083 0.889 80 656 128554 113369 0.041 65201 63353 58643 54726 4718120 4413401 27.753 48.179 0 0 9 1 1 9 1 1 ORF01691 TIGR4 9891 1 1 342 0.708877391317445 0.765140064919866 0.705014378205664 0.743821553140176 0.774505049876601 "YES" 58 1 2 9 "hypothetical protein" "SP0430" 3150 5220 110 12221 12091 4291 333 399 305 100 100 0 17254 17499 5963 434 487 280 100 100 0 0.707 0.689 0.683 0.682 1.281 0.693 0.932 80 656 28708 28823 -0.501 11888 16820 11758 17065 967303 1399907 38.334 60.757 0 0 9 2 2 9 1 1 ORF00383 TIGR4 8819 1 1 347 0.487051813082054 0.491773791725548 0.480563692928611 0.466684727913155 0.495597414186966 "YES" 59 1 3 9 "DNA-binding response regulator" "SP0387" 3410 5220 110 48717 47110 15062 351 493 701 100 100 8 9481 9172 3338 450 478 178 100 100 0 5.356 5.361 5.636 5.484 1.300 5.488 0.912 80 656 57397 55481 2.421 48366 9031 46759 8722 3768827 733769 66.501 48.843 0 0 9 3 3 9 1 1 ORF00332 TIGR4 8776 1 0 350 3.68974471126942 3.82641407465989 3.96552997561589 3.75263790011106 3.92473103760183 "YES" 60 1 4 9 "SPFH domain/Band 7 family" "SP2156" 3670 5220 110 52238 47882 15699 333 450 496 100 100 18 22498 21750 7639 440 480 219 100 100 0 2.353 2.231 2.224 2.259 1.216 2.274 0.942 80 656 73963 68859 1.235 51905 22058 47549 21310 3830524 1740038 95.629 97.123 0 0 9 4 4 9 1 1 ORF02495 TIGR4 10529 1 1 356 1.62098007946545 1.59237638510842 1.56482233246447 1.54580762515516 1.62624606040572 "YES" 61 1 5 9 "cytidine and deoxycytidylate deaminase family protein" "SP0744" 3930 5220 110 9593 9350 2580 329 371 230 100 100 0 6808 6733 1879 443 473 223 100 100 0 1.455 1.434 1.464 1.443 1.307 1.454 0.914 80 656 15629 15311 0.541 9264 6365 9021 6290 748008 538613 39.039 28.072 0 0 9 5 5 9 1 1 ORF00771 TIGR4 9129 1 1 382 1.002348497927 1.02351758684243 1.03008088791726 0.987428243957013 1.03982487767366 "YES" 62 1 6 9 "exonuclease RexB" "SP1151" 4190 5220 100 7279 7247 2182 345 371 191 100 100 0 7557 7549 2410 432 463 185 100 100 0 0.973 0.970 0.965 0.970 1.360 0.963 0.886 80 560 14059 14019 -0.039 6934 7125 6902 7117 579740 603883 36.000 38.303 0 0 9 6 6 9 1 1 ORF01254 TIGR4 9533 1 1 388 0.670299029885203 0.692337558742789 0.678980913142181 0.663759803630148 0.688687315818252 "YES" 63 1 7 9 "amino acid ABC transporter, permease protein" "SP0608" 4450 5220 100 2401 2395 720 318 356 199 100 100 0 2493 2476 746 401 419 135 100 100 0 0.996 1.001 1.030 1.024 1.612 0.965 0.726 80 560 4175 4152 -0.006 2083 2092 2077 2075 191631 198082 10.246 15.237 0 0 9 7 7 9 1 1 ORF00607 TIGR4 8994 1 1 394 0.686143714044874 0.714463810620136 0.724715378794245 0.700711380327084 0.690117611385891 "YES" 64 1 1 10 "membrane protein" "SP2017" 2900 5480 110 3472 3521 1020 338 377 208 100 100 0 2289 2353 667 422 441 143 100 100 0 1.679 1.648 1.683 1.648 1.476 1.673 0.820 80 656 5001 5114 0.747 3134 1867 3183 1931 281711 188251 15.115 13.371 0 0 10 1 1 10 1 1 ORF02305 TIGR4 10392 1 1 399 1.15666194365597 1.17626009980218 1.18417085680652 1.1277073777139 1.19644224233015 "YES" 65 1 2 10 "PTS system, lactose-specific IIBC components" "SP0478" 3160 5480 110 2533 2597 850 344 377 207 100 100 0 2207 2231 649 427 445 143 100 100 0 1.230 1.249 1.207 1.230 1.535 1.280 0.772 80 656 3969 4057 0.298 2189 1780 2253 1804 207764 178468 10.725 12.490 0 0 10 2 2 10 1 1 ORF00446 TIGR4 8867 1 1 433 0.847346152886742 0.891473825638911 0.849253846800635 0.841674802541321 0.915389163289058 "YES" 66 1 3 10 "branched-chain amino acid ABC transporter, ATP-binding protein" "SP0752" 3410 5480 110 34082 32507 9696 346 448 500 100 100 0 38730 35942 10294 447 527 369 100 100 0 0.881 0.906 0.895 0.896 1.213 0.913 0.961 80 656 72019 67656 -0.182 33736 38283 32161 35495 2600526 2875376 64.118 95.976 0 0 10 3 3 10 1 1 ORF00782 TIGR4 9137 1 1 444 0.60692029324652 0.646657554866976 0.629728411670727 0.613122457786198 0.652929926627273 "YES" 67 1 4 10 "6-phospho-beta-glucosidase" "SP0578" 3670 5480 110 3634 3716 993 335 387 258 100 100 0 3171 3159 1074 430 449 152 100 100 0 1.204 1.239 1.256 1.292 1.488 1.197 0.790 80 656 6040 6110 0.267 3299 2741 3381 2729 297301 252753 12.903 17.829 0 0 10 4 4 10 1 1 ORF00568 TIGR4 8964 1 1 450 0.829434770793201 0.884336325033315 0.883730597830652 0.884100686897063 0.856031897232033 "YES" 68 1 5 10 "DNA-binding response regulator" "SP1633" 3930 5480 110 12040 11821 2676 329 387 266 100 100 0 6872 6773 1563 433 464 204 100 100 0 1.819 1.813 1.799 1.829 1.221 1.828 0.943 80 656 18150 17832 0.863 11711 6439 11492 6340 945709 541866 42.985 30.926 0 0 10 5 5 10 1 1 ORF01838 TIGR4 10012 1 1 459 1.25310784723657 1.29402885979451 1.26578928781636 1.25156358849437 1.30729014882219 "YES" 69 1 6 10 "IS66 family element, Orf3, degenerate" "SP0644" 4190 5480 100 2580 2587 725 338 375 207 100 100 0 2142 2112 566 398 422 167 100 100 0 1.286 1.312 1.276 1.324 1.614 1.322 0.732 80 560 3986 3963 0.362 2242 1744 2249 1714 206941 168951 10.686 10.120 0 0 10 6 6 10 1 1 ORF00652 TIGR4 9029 1 1 507 0.885924514318983 0.936440079454165 0.89780274110821 0.905997917532284 0.94542537020948 "YES" 70 1 7 10 "hypothetical protein" "SP1134" 4450 5470 160 387 415 208 315 347 208 26 10 0 371 415 202 403 419 137 15 6 0 -2.250 8.333 1.277 1.102 5.945 0.013 0.000 208 1296 40 112 Error 72 -32 100 12 86238 86246 0.327 -0.029 -50 0 10 7 7 10 1 1 ORF01236 TIGR4 9516 1 1 517 -1 -1 -1 -1 -1 "NO" 71 1 1 11 "exoribonuclease, VacB/Rnb family" "SP0975" 2890 5740 110 20068 19043 5707 359 428 372 100 100 0 12816 12202 3626 424 460 210 100 100 0 1.590 1.586 1.601 1.570 1.307 1.614 0.929 80 656 32101 30462 0.669 19709 12392 18684 11778 1523426 976145 50.040 55.914 0 0 11 1 1 11 1 1 ORF01050 TIGR4 9358 1 1 525 1.09534990495115 1.13200759604749 1.12647506936853 1.07433287804055 1.1542485230848 "YES" 72 1 2 11 "jag protein, putative" "SP2040" 3150 5740 110 30981 30172 8894 373 565 1126 100 100 0 37993 36130 10583 431 548 754 100 100 0 0.815 0.835 0.842 0.832 1.220 0.837 0.937 80 656 68170 65498 -0.295 30608 37562 29799 35699 2413771 2890415 26.294 47.191 0 0 11 2 2 11 1 1 ORF02334 TIGR4 10415 1 1 536 0.561452938701377 0.595981300567246 0.592437231985198 0.569327996515755 0.598578695056985 "YES" 73 1 3 11 "toxin secretion ABC transporter, ATP-binding/permease protein" "SP1953" 3410 5740 100 5609 5624 1898 366 395 240 100 98 0 5781 5962 2042 444 473 167 100 100 0 0.982 0.953 0.971 0.934 1.589 0.939 0.819 80 560 10580 10776 -0.026 5243 5337 5258 5518 449953 476970 21.788 32.868 0 0 11 3 3 11 1 1 ORF02231 TIGR4 10329 1 1 437 0.676499123686813 0.680203807713276 0.683202556125448 0.639125419165524 0.671523769006582 "YES" 74 1 4 11 "conserved hypothetical protein" "SP2144" 3660 5740 90 1615 1752 609 388 433 280 100 96 0 924 963 368 435 461 164 92 63 0 2.509 2.583 2.732 3.052 2.339 2.585 0.421 52 420 1716 1892 1.327 1227 489 1364 528 91117 50095 4.711 3.061 0 0 11 4 4 11 1 1 ORF02477 TIGR4 10518 1 1 445 1.72844837202669 1.84361640642539 1.92225477171444 2.08844837183424 1.8486570211736 "YES" 75 1 5 11 "conserved hypothetical protein" "SP1004" 3930 5740 100 3156 3040 1016 331 363 196 100 100 0 3551 3614 1417 427 456 192 100 100 0 0.904 0.850 0.889 0.864 1.502 0.777 0.757 80 560 5949 5896 -0.145 2825 3124 2709 3187 243206 289097 13.658 16.448 0 0 11 5 5 11 1 1 ORF01087 TIGR4 9387 1 1 452 0.622764977406191 0.60668755147564 0.62550676868746 0.591225227150977 0.555669828027811 "YES" 76 1 6 11 "transcriptional regulator, authentic frameshift" "SP2123" 4190 5740 100 26011 25622 6886 370 451 415 100 100 0 25936 25580 6164 413 482 320 100 100 0 1.005 1.003 1.024 0.991 1.268 1.010 0.939 80 560 51164 50419 0.007 25641 25523 25252 25167 2049740 2046431 60.653 78.431 0 0 11 6 6 11 1 1 ORF02446 TIGR4 10497 1 1 460 0.692343807846484 0.715891310741255 0.720493735810978 0.678129861234512 0.722299261657772 "YES" 77 1 7 11 "licD2 protein" "SP1274" 4450 5740 100 12073 11194 3327 335 387 238 100 100 0 10577 10403 2583 407 427 146 100 100 0 1.154 1.086 1.102 1.055 1.384 1.103 0.892 80 560 21908 20855 0.207 11738 10170 10859 9996 895547 832277 45.408 68.329 0 0 11 7 7 11 1 1 ORF01399 TIGR4 9655 1 1 512 0.794989805228699 0.7751325657677 0.775375094593454 0.721924322504954 0.788808005552993 "YES" 78 1 1 12 "oxidoreductase, short chain dehydrogenase/reductase family" "SP1909" 2890 6000 100 30357 28713 8670 337 477 697 100 100 0 29488 26990 7621 431 536 510 100 100 0 1.033 1.068 1.058 1.056 1.313 1.075 0.939 80 560 59077 54935 0.047 30020 29057 28376 26559 2297006 2159211 40.511 51.871 0 0 12 1 1 12 1 1 ORF02179 TIGR4 10285 1 1 519 0.711632988562605 0.762285064677628 0.744416379382826 0.722608610962305 0.768783867606044 "YES" 79 1 2 12 "oxidoreductase, short chain dehydrogenase/reductase family" "SP0793" 3160 5990 110 36553 33246 10940 339 462 565 100 100 0 27633 25921 6524 440 511 384 100 100 0 1.332 1.291 1.291 1.204 1.479 1.369 0.931 80 656 63407 58388 0.413 36214 27193 32907 25481 2659712 2073693 58.025 66.172 0 0 12 2 2 12 1 1 ORF00828 TIGR4 9178 1 1 528 0.917613882638325 0.921451328182413 0.908356848566379 0.823883302650204 0.979037316049 "YES" 80 1 3 12 "glucosamine--fructose-6-phosphate aminotransferase, isomerizing" "SP0266" 3410 5990 110 10088 9486 3290 354 409 272 97 97 0 65535 62937 9050 468 743 2083 100 100 90 0.150 0.146 0.150 0.132 1.659 0.138 0.856 80 656 74801 71601 -2.741 9734 65067 9132 62469 758911 5034989 33.371 29.858 0 0 12 3 3 12 1 1 ORF00195 TIGR4 8657 1 1 537 0.103334896693505 0.104207508841698 0.105541074581686 0.0903260763702881 0.0986903941671015 "YES" 81 1 4 12 "conserved domain protein" "SP1175" 3670 6000 110 36120 34781 9615 328 392 319 100 100 0 33581 30050 9774 464 515 262 100 98 0 1.081 1.165 1.186 1.263 1.603 1.148 0.950 80 656 68909 64039 0.112 35792 33117 34453 29586 2782487 2404034 107.803 112.729 0 0 12 4 4 12 1 1 ORF01281 TIGR4 9557 1 1 604 0.744700155504527 0.831518820551907 0.834478096359199 0.864256321633893 0.820989655824873 "YES" 82 1 5 12 "DNA ligase, NAD-dependent" "SP1117" 3940 5990 110 27124 24389 8606 335 400 327 100 100 0 45294 40822 11451 453 532 395 100 100 0 0.597 0.596 0.589 0.538 1.551 0.606 0.962 80 656 71630 64423 -0.743 26789 44841 24054 40369 1951111 3265791 73.361 102.000 0 0 12 5 5 12 1 1 ORF01214 TIGR4 9499 1 1 625 0.41127288884015 0.425395036093508 0.414424619524088 0.368147190054659 0.433379556994663 "YES" 83 1 6 12 "DNA mismatch repair protein HexB" "SP0173" 4200 6000 110 65535 61476 10239 345 462 544 100 100 73 54749 49465 15944 440 516 368 100 100 10 1.200 1.247 1.193 1.388 1.574 1.232 0.917 80 656 119499 110156 0.263 65190 54309 61131 49025 4918050 3957171 112.158 133.014 0 0 12 6 6 12 1 1 ORF00084 TIGR4 8564 1 1 653 0.826679173548041 0.890046325517792 0.839403346506344 0.949792378802726 0.881062069665718 "YES" 84 1 7 12 "ribose-phosphate pyrophosphokinase" "SP0027" 4450 6000 110 65535 63212 7243 358 521 805 100 100 85 65535 61940 12592 454 765 2736 100 98 90 1.001 1.022 1.001 1.068 1.371 0.972 0.878 80 656 130258 124340 0.002 65177 65081 62854 61486 5056923 4955201 77.877 22.359 0 0 12 7 7 12 1 1 ORF02626 TIGR4 10639 1 1 679 0.689588210601324 0.729452561891887 0.704310771041786 0.730820072450513 0.695123645872628 "YES" 85 1 1 13 "ABC transporter, ATP-binding protein" "SP1435" 2890 6260 100 15045 14415 4941 348 400 344 100 100 0 8870 8372 3061 441 475 187 100 100 0 1.744 1.774 1.741 1.856 1.478 1.791 0.930 80 560 23126 21998 0.802 14697 8429 14067 7931 1153162 669738 40.741 42.230 0 0 13 1 1 13 1 1 ORF01601 TIGR4 9815 1 1 943 1.20144039888982 1.26619260743269 1.22498007231144 1.27003937684284 1.28082968082086 "YES" 86 1 2 13 "rod shape-determining protein MreC" "SP2218" 3160 6260 120 25898 25448 5931 319 353 223 100 100 0 34061 33598 10236 446 471 290 97 97 0 0.761 0.758 0.757 0.832 1.869 0.718 0.896 120 820 59194 58281 -0.394 25579 33615 25129 33152 3053806 4031765 112.534 114.231 0 0 13 2 2 13 1 1 ORF02567 TIGR4 10590 1 1 340 0.524252375891716 0.541022545904159 0.532630623055576 0.569327996515755 0.513476108782456 "YES" 87 1 3 13 "Hypothetical protein" "NTL02SP0419" 3420 6260 110 2704 2702 678 327 358 190 100 100 0 2640 2644 669 481 499 176 100 98 0 1.101 1.098 1.162 1.123 1.507 1.092 0.787 80 656 4536 4538 0.139 2377 2159 2375 2163 216195 211527 12.337 12.188 0 0 13 3 3 13 1 1 NTORFA0419 R6 11705 1 1 100 0.758478141730327 0.783697566494415 0.817591524426129 0.7684559376048 0.780941379930977 "YES" 88 1 4 13 "Conserved hypothetical protein" "NTL02SP0970" 3680 6250 110 1965 1983 579 309 346 188 100 98 0 2196 2251 551 484 512 213 100 100 0 0.967 0.947 0.991 0.927 1.737 0.952 0.606 80 656 3368 3441 -0.048 1656 1712 1674 1767 158640 180046 8.707 8.164 0 0 13 4 4 13 1 1 NTORFA0970 R6 11716 1 1 435 0.666165634017463 0.675921307349919 0.697274699403007 0.634335399964069 0.680820690196236 "YES" 89 1 5 13 "arginyl-tRNA synthetase" "SP2078" 3940 6250 110 65535 60563 14770 333 475 656 100 100 83 65535 63341 7542 455 586 588 100 100 87 1.002 0.958 1.002 0.896 1.469 0.968 0.905 80 656 130282 123116 0.003 65202 65080 60230 62886 4845032 5067311 91.598 106.726 0 0 13 5 5 13 1 1 ORF02382 TIGR4 10453 1 1 612 0.690277109912614 0.683772558016074 0.705014378205664 0.613122457786198 0.69226305473735 "YES" 90 1 6 13 "glycosyl transferase, group 1" "SP1758" 4200 6250 110 28432 26692 8587 321 405 385 100 100 0 30209 28311 7541 437 509 341 100 100 0 0.944 0.946 0.949 0.891 1.349 0.968 0.962 80 656 57883 54245 -0.083 28111 29772 26371 27874 2135385 2264842 68.278 81.531 0 0 13 6 6 13 1 1 ORF01994 TIGR4 10136 1 1 628 0.650320949857792 0.675207557289359 0.667723198520134 0.609701015499445 0.69226305473735 "YES" 91 1 7 13 "sugar ABC transporter, sugar-binding protein" "SP1897" 4440 6260 100 5610 5228 1825 327 366 261 100 100 0 5172 4974 1684 431 467 204 100 97 0 1.114 1.079 1.093 1.114 1.613 1.099 0.876 80 560 10024 9444 0.156 5283 4741 4901 4543 418212 397882 18.628 22.093 0 0 13 7 7 13 1 1 ORF02163 TIGR4 10273 1 1 657 0.767433832777098 0.770136315343783 0.769042630118553 0.762297341488644 0.785947414417714 "YES" 92 1 1 14 "glucokinase" "SP0668" 2890 6520 100 65535 60643 10848 334 591 1181 100 100 73 65535 57371 13245 444 600 692 100 100 52 1.002 1.059 1.002 1.074 1.271 1.051 0.955 80 560 130292 117236 0.002 65201 65091 60309 56927 4851469 4589646 50.848 82.039 0 0 14 1 1 14 1 1 ORF00683 TIGR4 9053 1 1 684 0.690277109912614 0.755861314132591 0.705014378205664 0.734925803194617 0.751620320794375 "YES" 93 1 2 14 "Tn5252, relaxase" "SP1056" 3160 6520 100 1549 1574 569 323 352 192 98 93 0 1198 1257 475 434 451 193 93 80 0 1.605 1.520 1.565 1.648 2.427 1.438 0.402 80 560 1990 2074 0.682 1226 764 1251 823 125906 100528 6.365 4.176 0 0 14 2 2 14 1 1 ORF01146 TIGR4 9439 1 1 989 1.1056833946205 1.08490009205056 1.10114521146893 1.1277073777139 1.02838251313255 "YES" 94 1 3 14 "signal peptidase I" "SP0402" 3420 6520 120 37253 34244 9645 321 361 262 100 100 0 27276 25292 7465 483 497 188 99 98 0 1.378 1.367 1.366 1.454 1.876 1.368 0.934 120 820 63725 58732 0.463 36932 26793 33923 24809 4109267 3035001 129.324 131.888 0 0 14 3 3 14 1 1 ORF00352 TIGR4 8791 1 1 402 0.949303250957666 0.975696332784941 0.961127385857222 0.994955416987871 0.97832216826518 "YES" 95 1 4 14 "Hypothetical protein" "NTL02SP1212" 3680 6520 110 4222 4174 941 324 355 208 100 100 0 6232 6072 1537 497 532 224 100 100 0 0.680 0.691 0.688 0.699 1.366 0.656 0.860 80 656 9633 9425 -0.557 3898 5735 3850 5575 333946 485758 18.361 24.732 0 0 14 4 4 14 1 1 NTORFA1212 R6 11726 1 1 123 0.468451531677223 0.493201291846667 0.484081728748001 0.478317631688117 0.469136946185642 "YES" 96 1 5 14 "Hypothetical protein" "NTL02SP0968" 3940 6520 110 1791 1828 478 323 350 181 100 100 0 1767 1792 508 453 470 152 100 100 0 1.117 1.124 1.107 1.161 1.689 1.083 0.679 80 650 2782 2844 0.160 1468 1314 1505 1339 146271 143345 8.166 8.697 0 0 14 5 5 14 1 1 NTORFA0968 R6 11714 1 1 542 0.769500530710968 0.802255068068964 0.778893130412844 0.794458898984125 0.774505049876601 "YES" 97 1 6 14 "Empty" "Empty" 4190 6510 160 303 338 172 319 468 2149 0 0 0 429 440 151 427 551 2029 0 0 0 -8.000 1.462 1.281 1.305 3.983 0.797 0.893 208 1248 -14 32 Error -16 2 19 13 70404 91612 -0.060 -0.055 -75 0 14 6 6 14 1 1 Empty Empty 0 0 0 0 -1 -1 -1 -1 -1 "NO" 98 1 7 14 "Empty" "Empty" 4450 6510 160 318 343 176 313 444 2165 0 0 0 427 448 156 416 521 2045 0 0 0 0.455 0.938 1.711 1.756 3.540 1.079 0.551 208 1218 16 62 -1.138 5 11 30 32 71415 93196 -0.047 -0.036 -75 0 14 7 7 14 1 1 Empty Empty 0 0 0 0 -1 -1 -1 -1 -1 "NO" 99 2 1 1 "type II restriction endonuclease, putative" "SP1037" 5140 3140 120 2028 2007 648 445 471 225 99 96 0 2031 2062 934 443 466 205 95 86 0 0.997 0.965 1.007 1.120 1.907 0.863 0.671 120 814 3171 3181 -0.005 1583 1588 1562 1619 240841 247386 6.827 7.785 0 0 1 1 8 1 1 2 ORF01124 TIGR4 9420 1 0 100 0.686832613356164 0.688768808439991 0.708532414025053 0.766403072232748 0.617172537436294 "YES" 100 2 2 1 "hypothetical protein" "SP0367" 5400 3140 130 1993 1989 552 411 453 228 100 100 0 1086 1145 423 439 453 149 95 88 0 2.445 2.235 2.504 2.485 1.953 2.291 0.512 120 902 2229 2284 1.290 1582 647 1578 706 238648 137350 6.737 4.644 0 0 1 2 9 1 1 2 ORF00311 TIGR4 8756 1 0 100 1.68435881610413 1.59523138535065 1.76183233835028 1.70045681651641 1.63840357273065 "YES" 101 2 3 1 "ribosomal protein L35" "SP0960" 5650 3140 120 13761 12130 5497 415 484 341 100 97 0 25528 22697 10336 442 497 374 100 99 0 0.532 0.526 0.525 0.530 1.492 0.516 0.937 120 814 38432 33970 -0.910 13346 25086 11715 22255 1455658 2723639 34.152 59.358 0 0 1 3 10 1 1 2 ORF01035 TIGR4 9344 1 0 103 0.366494433606298 0.375432531854337 0.369393761035902 0.362672882395854 0.369016256450901 "YES" 102 2 4 1 "IS630-Spn1, transposase Orf1" "SP0299" 5920 3140 120 18130 17274 7102 436 522 792 99 96 0 12620 11618 4942 442 524 1324 95 90 0 1.453 1.507 1.528 1.541 1.573 1.458 0.893 120 820 29872 28014 0.539 17694 12178 16838 11176 2072889 1394110 21.152 8.379 0 0 1 4 11 1 1 2 ORF00234 TIGR4 8690 1 0 104 1.00097069930442 1.07562134126328 1.07511174640544 1.05448851277738 1.04268546880894 "YES" 103 2 5 1 "hypothetical protein" "SP2005" 6180 3140 120 10238 9552 3563 446 501 322 100 99 0 1141 1220 534 434 469 185 94 77 0 13.850 11.585 12.333 12.338 2.067 13.288 0.426 120 820 10499 9892 3.792 9792 707 9106 786 1146217 146432 28.109 4.059 0 0 1 5 12 1 1 2 ORF02292 TIGR4 10381 1 0 125 9.54125546136697 8.26879445158269 8.67758715210624 8.44275098679254 9.50288375139453 "YES" 104 2 6 1 "bacteriocin BlpM" "SP0539" 6440 3140 130 1902 1952 588 433 467 236 99 99 0 1136 1141 479 439 461 153 89 81 0 2.108 2.164 2.211 2.422 2.130 2.307 0.481 120 912 2166 2221 1.076 1469 697 1519 702 234202 136924 6.292 4.444 0 0 1 6 13 1 1 2 ORF00519 TIGR4 8927 0 0 134 1.45219974819939 1.54455513105092 1.55567543933405 1.65734664370332 1.64984593727176 "YES" 105 2 7 1 "hypothetical protein" "SP0142" 6700 3140 130 5155 4939 1685 445 479 233 100 100 0 3256 3066 1217 443 468 173 99 96 0 1.674 1.713 1.688 1.835 1.685 1.690 0.775 120 934 7523 7117 0.744 4710 2813 4494 2623 592696 367860 19.142 15.017 0 0 1 7 14 1 1 2 ORF00046 TIGR4 8533 1 1 145 1.15321744709952 1.22265385373855 1.18768889262591 1.25566931923847 1.20859975465508 "YES" 106 2 1 2 "hypothetical protein" "SP0125" 5140 3400 150 1495 1566 493 436 462 228 99 92 0 901 972 461 434 451 158 85 72 0 2.268 2.100 2.041 2.313 2.306 2.144 0.328 156 1118 1526 1668 1.181 1059 467 1130 538 244220 151579 4.842 3.297 0 0 2 1 8 2 1 2 ORF00028 TIGR4 8517 1 0 159 1.5624236380058 1.49887512717511 1.43606222147481 1.58275920185209 1.53327684850917 "YES" 107 2 2 2 "hypothetical protein" "SP1455" 5400 3400 150 3075 3094 1300 426 462 232 100 98 0 2089 2114 1211 427 444 160 95 91 0 1.594 1.582 1.701 1.881 1.884 1.474 0.712 156 1121 4311 4355 0.673 2649 1662 2668 1687 482721 329818 11.345 10.438 0 0 2 2 9 2 1 2 ORF01626 TIGR4 9835 1 0 100 1.09810550219631 1.12915259580525 1.19683578575632 1.28714658827661 1.05412783335006 "YES" 108 2 3 2 "hypothetical protein" "SP0147" 5660 3400 120 2496 2518 708 420 452 230 100 99 0 1484 1591 637 430 446 147 98 96 0 1.970 1.807 2.031 1.983 1.880 1.840 0.569 120 814 3130 3259 0.978 2076 1054 2098 1161 302177 190970 8.983 7.789 0 0 2 3 10 2 1 2 ORF00053 TIGR4 8538 1 0 101 1.35713164324137 1.28974635943115 1.42902614983603 1.35694401092637 1.31587192222802 "YES" 109 2 4 2 "hypothetical protein" "SP1209" 5920 3400 130 1958 2059 617 417 450 226 100 97 0 1273 1323 510 427 449 260 90 73 0 1.822 1.833 1.865 1.991 2.134 1.988 0.505 120 922 2387 2538 0.865 1541 846 1642 896 247036 158753 7.119 3.362 0 0 2 4 11 2 1 2 ORF01323 TIGR4 9591 1 0 103 1.25517454517044 1.3083038610057 1.3122273606323 1.36241831858518 1.42171379423332 "YES" 110 2 5 2 "hypothetical protein" "SP0003" 6180 3400 130 2863 2914 900 430 469 233 100 100 0 2682 2718 970 422 464 277 98 98 0 1.077 1.082 1.083 1.129 1.610 1.034 0.688 120 912 4693 4780 0.106 2433 2260 2484 2296 349735 326159 10.494 8.137 0 0 2 5 12 2 1 2 ORF02594 TIGR4 10615 1 0 105 0.741944558259366 0.772277565525462 0.762006558479774 0.772561668348904 0.739462808469442 "YES" 111 2 6 2 "IS3-Spn1, hypothetical protein, authentic point mutation" "SP0393" 6440 3400 140 1917 1969 633 425 459 238 99 96 0 1317 1343 608 419 453 192 88 79 0 1.661 1.671 1.829 1.895 1.915 1.555 0.494 156 1036 2390 2468 0.732 1492 898 1544 924 307232 209537 6.345 4.635 0 0 2 6 13 2 1 2 ORF00342 TIGR4 8782 1 0 128 1.14426175605275 1.19267635119505 1.28689750273269 1.29672662667951 1.11205480383944 "YES" 112 2 7 2 "hypothetical protein" "SP0997" 6690 3410 130 2434 2459 692 418 451 226 99 98 0 1293 1374 532 430 457 194 94 88 0 2.336 2.162 2.248 2.400 1.867 0.241 0.063 120 908 2879 2985 1.224 2016 863 2041 944 295081 164864 8.885 4.727 0 0 2 7 14 2 1 2 ORF01079 TIGR4 9380 1 0 138 1.60926879117352 1.5431276309298 1.58170890439754 1.6422922976416 0.172350615900518 "YES" 113 2 1 3 "hypothetical protein" "SP0772" 5140 3660 120 2273 2294 787 416 451 223 99 97 0 1278 1387 613 434 452 144 97 90 0 2.200 1.971 2.188 2.196 1.846 1.985 0.565 120 814 2701 2831 1.138 1857 844 1878 953 275305 166495 8.265 6.493 0 0 3 1 8 3 1 2 ORF00803 TIGR4 9157 1 0 146 1.51557848483807 1.40680136936293 1.53949247456486 1.50269745234207 1.41956835088186 "YES" 114 2 2 3 "hypothetical protein" "SP1146" 5390 3660 110 4044 4035 1183 423 491 318 100 100 0 4903 4943 1505 439 474 220 100 100 0 0.811 0.802 0.782 0.798 1.449 0.790 0.788 80 656 8085 8116 -0.302 3621 4464 3612 4504 322777 395407 11.145 20.314 0 0 3 2 9 3 1 2 ORF01249 TIGR4 9528 1 0 162 0.558697341456217 0.57242754856878 0.550220802152524 0.546062188965833 0.564966749217465 "YES" 115 2 3 3 "conserved hypothetical protein" "SP0783" 5650 3660 110 12219 11918 2645 432 543 516 100 100 0 3824 3813 806 436 474 217 100 100 0 3.479 3.401 3.421 3.366 1.356 3.524 0.893 80 656 15175 14863 1.799 11787 3388 11486 3377 953439 305042 22.045 15.387 0 0 3 3 10 3 1 2 ORF00816 TIGR4 9168 1 0 252 2.39668070397803 2.42746395596312 2.40704010762632 2.30331494744235 2.52018079018019 "YES" 116 2 4 3 "conserved hypothetical protein" "SP0471" 5920 3660 110 4503 4566 1153 401 448 255 100 100 0 3032 3231 1033 426 450 165 100 100 0 1.574 1.485 1.491 1.522 1.445 1.462 0.819 80 656 6708 6970 0.654 4102 2606 4165 2805 365302 258466 16.149 16.855 0 0 3 4 11 3 1 2 ORF00439 TIGR4 8860 1 1 253 1.08432751597051 1.05991883993097 1.04907828134196 1.04148703208772 1.04554605994422 "YES" 117 2 5 3 "preprotein translocase, YajC subunit" "SP2029" 6170 3660 110 17412 17514 4085 419 570 653 100 100 0 14510 14596 2985 434 516 369 100 100 0 1.207 1.207 1.218 1.187 1.240 1.226 0.939 80 656 31069 31257 0.272 16993 14076 17095 14162 1401126 1167682 25.948 38.157 0 0 3 5 12 3 1 2 ORF02321 TIGR4 10404 1 1 254 0.831501468727071 0.861496323095409 0.856993525603292 0.812250398875242 0.8767711829628 "YES" 118 2 6 3 "conserved hypothetical protein" "SP1106" 6430 3660 110 20747 20246 4144 437 573 626 100 100 0 25397 25423 4273 420 527 485 100 100 0 0.813 0.792 0.797 0.778 1.234 0.804 0.949 80 656 45287 44812 -0.298 20310 24977 19809 25003 1619677 2033807 31.427 51.332 0 0 3 6 13 3 1 2 ORF01202 TIGR4 9488 1 1 256 0.560075140078797 0.565290047963185 0.560774909610693 0.532376419818819 0.574978818190939 "YES" 119 2 7 3 "ribosomal protein L22" "SP0214" 6690 3660 110 17955 17369 3838 428 524 449 100 100 0 20707 20722 4680 421 491 361 100 100 0 0.864 0.834 0.834 0.832 1.196 0.835 0.940 80 656 37813 37242 -0.211 17527 20286 16941 20301 1389551 1657767 37.517 56.042 0 0 3 7 14 3 1 2 ORF00130 TIGR4 8605 1 1 266 0.595209004954589 0.595267550506687 0.586808374674175 0.569327996515755 0.597148399489346 "YES" 120 2 1 4 "ABC transporter, substrate-binding protein" "SP1690" 5130 3920 110 2644 2659 726 424 475 299 100 100 0 1265 1279 491 427 454 166 92 82 0 2.649 2.623 2.500 2.921 2.111 3.036 0.514 80 656 3058 3087 1.406 2220 838 2235 852 212695 102333 7.304 4.970 0 0 4 1 8 4 1 2 ORF01909 TIGR4 10069 1 1 268 1.8248942756073 1.87216640884777 1.75901790969477 1.9988065839213 2.17118867167623 "YES" 121 2 2 4 "phospho-2-dehydro-3-deoxyheptonate aldolase" "SP1700" 5390 3920 110 13132 12719 2871 412 513 525 100 100 0 14926 14986 2778 418 497 415 100 100 0 0.877 0.845 0.854 0.822 1.362 0.843 0.909 80 656 27228 26875 -0.190 12720 14508 12307 14568 1017525 1198856 23.250 34.913 0 0 4 2 9 4 1 2 ORF01923 TIGR4 10079 1 1 270 0.60416469600136 0.603118801172842 0.600880517951733 0.562485111942249 0.602869581759903 "YES" 122 2 3 4 "ribosome-binding factor A" "SP0557" 5650 3920 110 4999 4964 1161 429 494 337 100 100 0 5228 5210 1145 430 474 218 100 100 0 0.952 0.949 0.966 0.941 1.313 0.949 0.846 80 656 9368 9315 -0.070 4570 4798 4535 4780 397081 416793 13.264 21.725 0 0 4 3 10 4 1 2 ORF00540 TIGR4 8943 1 1 273 0.655832144348112 0.677348807471038 0.679684520306059 0.643915438366978 0.678675246844778 "YES" 123 2 4 4 "DNA-binding response regulator" "SP0661" 5910 3920 110 8244 8121 1905 412 485 420 100 100 0 4404 4663 1151 438 464 191 100 100 0 1.975 1.825 1.887 1.809 1.411 1.906 0.844 80 656 11798 11934 0.982 7832 3966 7709 4225 649700 373057 18.181 21.984 0 0 4 4 11 4 1 2 ORF00675 TIGR4 9046 1 1 252 1.36057613979782 1.30259386052123 1.32770671823761 1.23787781934736 1.36307167596011 "YES" 124 2 5 4 "acylphosphatase" "SP1974" 6170 3920 110 3016 2958 670 386 438 252 100 100 0 1650 1612 540 421 450 185 98 93 0 2.140 2.160 2.192 2.380 1.864 2.137 0.617 80 656 3859 3763 1.098 2630 1229 2572 1191 236612 128966 10.000 6.281 0 0 4 5 12 4 1 2 ORF02256 TIGR4 10350 1 1 253 1.47424452616067 1.54170013080869 1.54230690322037 1.62860652849459 1.52827081402243 "YES" 125 2 6 4 "sodium:solute symporter family protein" "SP1328" 6430 3930 120 1548 1632 511 412 439 220 100 97 0 936 1008 436 424 446 272 75 48 0 2.219 2.089 1.987 2.380 2.397 2.284 0.377 120 820 1648 1804 1.150 1136 512 1220 584 195803 120955 5.423 2.066 0 0 4 6 13 4 1 2 ORF01464 TIGR4 9709 1 1 255 1.52866757175258 1.49102387650896 1.3980674346254 1.62860652849459 1.63339753824391 "YES" 126 2 7 4 "transcriptional regulator, GntR family" "SP1714" 6690 3920 110 15688 16050 5356 431 534 591 100 100 0 2296 2428 761 420 435 179 100 100 0 8.133 7.778 8.064 7.923 1.535 8.548 0.773 80 656 17133 17627 3.024 15257 1876 15619 2008 1284005 194225 26.254 11.134 0 0 4 7 14 4 1 2 ORF01937 TIGR4 10093 1 1 257 5.60281809872184 5.55154797103239 5.67388816951145 5.42161744758934 6.11308325608974 "YES" 127 2 1 5 "conserved hypothetical protein" "SP2209" 5140 4180 110 11428 11434 2178 408 480 331 100 100 0 7708 7628 1356 430 458 167 100 100 0 1.514 1.532 1.554 1.523 1.230 1.552 0.919 80 656 18298 18224 0.599 11020 7278 11026 7198 914696 610215 33.094 42.934 0 0 5 1 8 5 1 2 ORF02556 TIGR4 10581 1 1 267 1.04299355729311 1.09346509277727 1.09340553266627 1.04217132054507 1.10990936048798 "YES" 128 2 2 5 "conserved hypothetical protein" "SP1750" 5390 4180 110 19923 19406 4435 403 557 768 100 100 0 16253 15798 2737 413 508 436 100 100 0 1.232 1.235 1.236 1.198 1.324 1.256 0.918 80 656 35360 34388 0.301 19520 15840 19003 15385 1552471 1263806 24.543 35.069 0 0 5 2 9 5 1 2 ORF01983 TIGR4 10128 1 1 268 0.848723951509322 0.881481324791077 0.869658454553094 0.8197775719061 0.898225616477388 "YES" 129 2 3 5 "transcription-repair coupling factor" "SP0006" 5650 4180 110 7572 7573 1732 400 461 305 100 100 0 12038 12340 2349 412 476 290 100 100 0 0.617 0.601 0.603 0.591 1.310 0.592 0.890 80 656 18798 19101 -0.697 7172 11626 7173 11928 605863 987205 23.318 40.910 0 0 5 3 10 5 1 2 ORF02597 TIGR4 10618 1 1 271 0.425050875065951 0.428963786396306 0.424275119818378 0.404414478294244 0.423367488021189 "YES" 130 2 4 5 "ribosomal protein L13" "SP0294" 5900 4180 110 18046 17965 5821 423 688 1523 98 97 0 33043 33610 9475 415 798 2551 100 100 0 0.540 0.528 0.533 0.503 1.415 0.522 0.937 80 656 50251 50737 -0.889 17623 32628 17542 33195 1437217 2688818 11.344 12.862 0 0 5 4 11 5 1 2 ORF00229 TIGR4 8685 1 1 274 0.372005628096618 0.376860031975456 0.375022618346925 0.344197094047386 0.373307143153819 "YES" 131 2 5 5 "autoinducer-2 production protein" "SP0340" 6160 4180 110 9821 9593 2154 415 550 721 100 100 0 9297 9430 1901 423 530 630 100 100 0 1.060 1.019 1.019 1.009 1.290 1.004 0.906 80 656 18280 18185 0.084 9406 8874 9178 9007 767433 754397 12.542 14.127 0 0 5 5 12 5 1 2 ORF00280 TIGR4 8729 1 1 285 0.730233269967436 0.727311311710208 0.716975699991588 0.690447053466824 0.718008374954854 "YES" 132 2 6 5 "adenine phosphoribosyltransferase" "SP1577" 6430 4180 110 12871 12763 2130 433 505 368 100 100 0 13347 13291 2041 428 483 360 100 100 0 0.963 0.959 0.941 0.954 1.203 0.959 0.932 80 656 25357 25193 -0.055 12438 12919 12330 12863 1021004 1063314 33.310 35.578 0 0 5 6 13 5 1 2 ORF01774 TIGR4 9957 1 1 287 0.663410036772302 0.684486308076634 0.662094341209111 0.652811188312537 0.685826724682974 "YES" 133 2 7 5 "hypothetical protein" "SP0781" 6690 4180 110 13085 12688 2143 416 498 406 100 100 0 8967 8863 1632 416 464 250 100 100 0 1.482 1.453 1.444 1.457 1.287 1.485 0.903 80 656 21220 20719 0.567 12669 8551 12272 8447 1015027 709013 30.025 33.596 0 0 5 7 14 5 1 2 ORF00813 TIGR4 9166 1 1 290 1.02094877933183 1.03707883799306 1.0160087446397 0.997008282359923 1.06199445897207 "YES" 134 2 1 6 "pyruvate kinase" "SP0897" 5130 4440 110 59314 57915 8923 411 742 1700 100 100 27 65535 65006 1939 432 867 2901 100 100 90 0.905 0.891 0.921 0.876 1.201 0.887 0.935 80 656 124006 122078 -0.144 58903 65103 57504 64574 4633186 5200501 33.631 22.109 0 0 6 1 8 6 1 2 ORF00957 TIGR4 9281 1 1 293 0.623453876717481 0.635951303958583 0.648022197931553 0.599436688639185 0.634336084247964 "YES" 135 2 2 6 "O-antigen transporter RfbX, putative" "SP0356" 5400 4440 120 45098 41509 18560 406 461 349 100 100 9 65535 57110 17294 428 486 341 100 100 72 0.686 0.725 0.745 0.655 1.571 0.737 0.858 120 820 109799 97785 -0.543 44692 65107 41103 56682 4981073 6853213 117.616 166.053 0 0 6 2 9 6 1 2 ORF00298 TIGR4 8745 1 1 308 0.472584927544963 0.517468793905693 0.524187337089041 0.448208939564687 0.527063916675028 "YES" 136 2 3 6 "potassium uptake protein, Trk family" "SP0078" 5660 4440 120 21207 19437 8098 395 434 250 100 100 0 15220 13779 5852 435 453 179 100 100 0 1.408 1.427 1.422 1.436 1.448 1.424 0.960 120 814 35597 32386 0.493 20812 14785 19042 13344 2332487 1653435 76.012 74.447 0 0 6 3 10 6 1 2 ORF02688 TIGR4 10688 1 1 312 0.969970230296368 1.01852133641852 1.00052938703438 0.982638224755559 1.01837044415908 "YES" 137 2 4 6 "IS1381, transposase OrfA, authentic frameshift" "SP1085" 5910 4440 120 18458 16214 7781 374 420 251 100 100 0 14167 13030 6152 403 431 159 99 99 0 1.314 1.254 1.265 1.283 1.725 1.261 0.952 120 814 31848 28467 0.394 18084 13764 15840 12627 1945706 1563568 62.924 79.239 0 0 6 4 11 6 1 2 ORF01175 TIGR4 9467 1 0 316 0.905213695035104 0.895042575941709 0.890063062305553 0.877942090780906 0.901801355396486 "YES" 138 2 5 6 "MutT/nudix family protein" "SP0740" 6180 4440 110 12752 12732 3799 386 440 286 100 100 0 12755 12915 4304 422 471 261 100 100 0 1.003 0.988 0.986 1.003 1.191 0.960 0.954 80 656 24699 24839 0.004 12366 12333 12346 12493 1018576 1033197 42.979 47.678 0 0 6 5 12 6 1 2 ORF00765 TIGR4 9125 1 0 319 0.690966009223904 0.705185059832862 0.693756663583617 0.68634132272272 0.686541872466793 "YES" 139 2 6 6 "conserved hypothetical protein" "SP0434" 6440 4440 110 6050 6039 1153 411 454 245 100 100 0 6433 6549 1511 433 480 625 100 100 0 0.940 0.920 0.940 0.933 1.322 0.898 0.887 80 656 11639 11744 -0.090 5639 6000 5628 6116 483107 523938 22.796 9.710 0 0 6 6 13 6 1 2 ORF00389 TIGR4 8823 1 1 286 0.647565352612632 0.65665005571481 0.661390734045233 0.638441130708173 0.64220270986998 "YES" 140 2 7 6 "conserved hypothetical protein" "SP0909" 6700 4430 110 18425 17398 4287 396 490 400 100 100 0 17962 17739 3216 430 494 291 100 100 0 1.028 0.982 1.007 0.934 1.427 0.998 0.948 80 656 35561 34311 0.040 18029 17532 17002 17309 1391825 1419096 42.270 59.261 0 0 6 7 14 6 1 2 ORF00974 TIGR4 9293 1 1 288 0.708188492006155 0.700902559469504 0.708532414025053 0.639125419165524 0.713717488251937 "YES" 141 2 1 7 "conserved hypothetical protein" "SP0721" 5140 4700 110 2421 2446 556 359 389 211 100 100 0 1667 1757 845 410 438 168 100 98 0 1.640 1.549 1.708 1.669 1.689 1.392 0.518 80 656 3319 3434 0.714 2062 1257 2087 1347 195710 140553 9.749 7.851 0 0 7 1 8 7 1 2 ORF00741 TIGR4 9106 1 1 291 1.12979487051566 1.10559884380678 1.20176103590347 1.14207743531826 0.99548571507685 "YES" 142 2 2 7 "v-type sodium ATP synthase, subunit C" "SP1319" 5400 4700 110 1988 2021 522 374 399 210 100 100 0 1332 1348 455 407 426 143 97 93 0 1.745 1.750 1.846 1.931 2.020 1.974 0.506 80 656 2539 2588 0.803 1614 925 1647 941 161668 107802 7.724 6.448 0 0 7 2 9 7 1 2 ORF01454 TIGR4 9700 1 1 294 1.20212929820111 1.24906260597926 1.29885882451862 1.32136101114414 1.41170172525984 "YES" 143 2 3 7 "MutT/nudix family protein" "SP1235" 5650 4700 110 7389 7322 2013 389 470 1247 100 97 0 5378 5612 1561 414 443 180 100 100 0 1.410 1.334 1.336 1.335 1.328 1.361 0.903 80 656 11964 12131 0.496 7000 4964 6933 5198 585747 448940 5.495 28.717 0 0 7 3 10 7 1 2 ORF01353 TIGR4 9617 1 1 309 0.971348028918948 0.952142580786475 0.940019170940885 0.913525090563141 0.973316133778443 "YES" 144 2 4 7 "rod shpae-determining protein MreD, putative" "SP2217" 5910 4700 110 13799 13641 4041 372 457 375 100 100 0 20446 19988 5860 407 490 374 100 100 0 0.670 0.678 0.668 0.683 1.286 0.669 0.944 80 656 33466 32850 -0.578 13427 20039 13269 19581 1091243 1599015 35.157 52.134 0 0 7 4 11 7 1 2 ORF02566 TIGR4 10589 1 1 313 0.461562538564323 0.483922541059393 0.470009585470442 0.467369016370506 0.478433867375297 "YES" 145 2 5 7 "choline transporter" "SP1860" 6170 4700 110 30285 29703 9807 383 498 497 100 100 0 21065 20407 6111 426 496 320 100 100 0 1.449 1.467 1.485 1.455 1.265 1.495 0.955 80 656 50541 49301 0.535 29902 20639 29320 19981 2376240 1632595 58.763 62.222 0 0 7 5 12 7 1 2 ORF02118 TIGR4 10236 1 1 317 0.998215102059259 1.0470713388409 1.04485663835869 0.995639705445221 1.06914593681027 "YES" 146 2 6 7 "single-strand binding protein" "SP1540" 6430 4700 110 9350 9405 3277 359 412 253 100 100 0 10850 10878 4426 422 458 215 100 100 0 0.862 0.865 0.873 0.888 1.393 0.826 0.877 80 656 19419 19502 -0.214 8991 10428 9046 10456 752400 870226 35.545 48.465 0 0 7 6 13 7 1 2 ORF01727 TIGR4 9920 1 1 321 0.593831206332009 0.617393802384034 0.614249054065414 0.607648150127393 0.59071206943497 "YES" 147 2 7 7 "S-adenosylmethionine synthetase" "SP0762" 6690 4700 110 40211 39564 13880 406 594 988 100 100 0 27169 26849 9170 415 532 636 100 100 0 1.488 1.481 1.509 1.470 1.232 1.502 0.965 80 656 66559 65592 0.573 39805 26754 39158 26434 3165093 2147903 39.443 41.379 0 0 7 7 14 7 1 2 ORF00793 TIGR4 9147 1 1 341 1.02508217519957 1.05706383968873 1.06174321029176 1.00590403230548 1.074151971297 "YES" 148 2 1 8 "IS1167, transposase, interruption" "SP1905" 5130 4960 110 9191 9058 2873 331 371 219 100 100 0 11907 11734 3270 427 448 165 100 100 0 0.772 0.772 0.780 0.752 1.270 0.779 0.942 80 656 20340 20034 -0.374 8860 11480 8727 11307 724664 938753 39.667 68.400 0 0 8 1 8 8 1 2 ORF02173 TIGR4 10281 1 1 345 0.531830268315906 0.551015046751993 0.548813587824768 0.514584919927702 0.55710012359545 "YES" 149 2 2 8 "conserved hypothetical protein" "SP1069" 5390 4960 110 8233 8217 2586 322 365 254 100 100 0 14487 14033 4271 407 452 214 100 100 0 0.562 0.579 0.589 0.579 1.284 0.569 0.922 80 656 21991 21521 -0.832 7911 14080 7895 13626 657384 1122630 30.913 63.463 0 0 8 2 9 8 1 2 ORF01158 TIGR4 9451 1 1 349 0.387161412944999 0.413261285063995 0.414424619524088 0.396203016806036 0.406919088993339 "YES" 150 2 3 8 "type II DNA modification methyltransferase, putative" "SP1431" 5650 4960 110 10288 10391 3707 348 405 312 100 100 0 8039 8263 2767 422 452 196 100 100 0 1.305 1.281 1.277 1.272 1.319 1.313 0.917 80 656 17557 17884 0.384 9940 7617 10043 7841 831243 661017 32.006 39.852 0 0 8 3 10 8 1 2 ORF01597 TIGR4 9811 1 1 355 0.899013601233494 0.914313827576818 0.898506348272088 0.870414917750049 0.938989040155104 "YES" 151 2 4 8 "conserved hypothetical protein TIGR00045" "SP1126" 5910 4960 100 2843 2911 857 343 382 236 100 100 0 3048 3112 837 407 431 156 100 100 0 0.947 0.949 0.996 0.940 1.536 0.934 0.760 80 560 5141 5273 -0.079 2500 2641 2568 2705 232864 248934 10.716 17.186 0 0 8 4 11 8 1 2 ORF01225 TIGR4 9508 1 1 379 0.652387647791662 0.677348807471038 0.700792735222396 0.643231149909627 0.667948030087484 "YES" 152 2 5 8 "transcriptional regulator, biotin repressor family" "SP1234" 6170 4960 100 17870 17482 5790 367 425 299 100 100 0 14369 13943 4281 421 462 226 100 100 0 1.255 1.266 1.297 1.251 1.311 1.280 0.940 80 560 31451 30637 0.328 17503 13948 17115 13522 1398559 1115445 57.047 59.650 0 0 8 5 12 8 1 2 ORF01352 TIGR4 9616 1 1 386 0.864568635668992 0.903607576668424 0.912578491549646 0.856044860145685 0.915389163289058 "YES" 153 2 6 8 "ABC transporter, ATP-binding protein" "SP2196" 6430 4960 100 5488 5240 1455 351 399 227 100 100 0 6298 6216 1550 410 433 164 100 100 0 0.872 0.842 0.883 0.831 1.353 0.832 0.885 80 560 11025 10695 -0.197 5137 5888 4889 5806 419222 497264 21.326 35.262 0 0 8 6 13 8 1 2 ORF02542 TIGR4 10568 1 1 393 0.60072019944491 0.600977550991163 0.621285125704193 0.568643708058405 0.595002956137887 "YES" 154 2 7 8 "ribosomal protein L2" "SP0212" 6700 4960 120 15349 14783 7378 339 372 200 100 100 0 19473 18702 9384 394 425 417 99 97 0 0.787 0.789 0.774 0.788 1.892 0.778 0.931 120 820 34089 32752 -0.346 15010 19079 14444 18308 1773970 2244212 72.055 43.830 0 0 8 7 14 8 1 2 ORF00127 TIGR4 8603 1 1 398 0.542163757985257 0.563148797781506 0.544591944841501 0.539219304392326 0.55638497581163 "YES" 155 2 1 9 "ATP synthase F1, delta subunit" "SP1511" 5130 5220 110 65535 57337 11673 326 822 2523 100 100 52 60904 53589 13196 411 708 1593 100 100 40 1.078 1.072 1.002 1.082 1.181 1.074 0.932 80 656 125702 110189 0.108 65209 60493 57011 53178 4586941 4287122 22.400 33.196 0 0 9 1 8 9 1 2 ORF01691 TIGR4 9891 1 1 342 0.742633457570656 0.765140064919866 0.705014378205664 0.740400110853422 0.768068719822225 "YES" 156 2 2 9 "hypothetical protein" "SP0430" 5390 5220 100 11822 12209 4714 323 421 421 100 100 0 15989 17019 6220 419 510 437 100 100 0 0.739 0.716 0.713 0.705 1.303 0.713 0.934 80 560 27069 28486 -0.437 11499 15570 11886 16600 976722 1361551 28.000 37.778 0 0 9 2 9 9 1 2 ORF00383 TIGR4 8819 1 1 347 0.509096591043335 0.511045043360657 0.501671907844948 0.482423362432221 0.509900369863358 "YES" 157 2 3 9 "DNA-binding response regulator" "SP0387" 5650 5220 110 43903 42777 14866 335 561 1123 100 100 0 8685 8647 2817 420 461 288 100 100 0 5.271 5.159 5.235 5.166 1.313 5.369 0.922 80 656 51833 50669 2.398 43568 8265 42442 8227 3422144 691735 37.592 28.424 0 0 9 3 10 9 1 2 ORF00332 TIGR4 8776 1 0 350 3.63118826980977 3.68223656242686 3.68338350290085 3.53503417067355 3.8396284513273 "YES" 158 2 4 9 "SPFH domain/Band 7 family" "SP2156" 5910 5220 110 44236 44194 15452 339 474 646 100 100 10 20038 20348 6977 426 472 289 100 100 0 2.238 2.201 2.230 2.195 1.225 2.241 0.952 80 656 63509 63777 1.162 43897 19612 43855 19922 3535530 1627842 67.678 68.775 0 0 9 4 11 9 1 2 ORF02495 TIGR4 10529 1 1 356 1.5417566586671 1.57096388329163 1.56904397544773 1.50201316388472 1.60264618353967 "YES" 159 2 5 9 "cytidine and deoxycytidylate deaminase family protein" "SP0744" 6170 5220 100 9143 9148 2386 354 396 229 100 100 0 6778 6653 1750 422 442 164 100 100 0 1.383 1.411 1.396 1.412 1.264 1.414 0.914 80 560 15145 15025 0.468 8789 6356 8794 6231 731860 532232 38.218 37.872 0 0 9 5 12 9 1 2 ORF00771 TIGR4 9129 1 1 382 0.952747747514117 1.00710133544956 0.982235600773559 0.966215301779142 1.01121896632088 "YES" 160 2 6 9 "exonuclease RexB" "SP1151" 6430 5220 100 7269 7225 2216 350 379 211 100 100 0 7646 7669 2455 409 448 221 100 100 0 0.956 0.947 0.976 0.953 1.304 0.935 0.906 80 560 14156 14135 -0.065 6919 7237 6875 7260 577969 613555 32.445 32.674 0 0 9 6 13 9 1 2 ORF01254 TIGR4 9533 1 1 388 0.658587741593272 0.675921307349919 0.686720591944838 0.652126899855186 0.668663177871304 "YES" 161 2 7 9 "amino acid ABC transporter, permease protein" "SP0608" 6700 5220 100 2429 2465 754 332 359 192 100 100 0 2736 2719 886 391 410 137 100 100 0 0.894 0.916 0.902 0.931 1.619 0.875 0.701 80 560 4442 4461 -0.161 2097 2345 2133 2328 197206 217552 10.969 16.854 0 0 9 7 14 9 1 2 ORF00607 TIGR4 8994 1 1 394 0.61587598429329 0.653795055472572 0.634653661817873 0.637072553793471 0.625754310842129 "YES" 162 2 1 10 "membrane protein" "SP2017" 5150 5480 100 3546 3399 924 350 382 199 100 100 0 2428 2409 790 408 419 143 100 100 0 1.582 1.524 1.518 1.583 1.574 1.512 0.771 80 560 5216 5050 0.662 3196 2020 3049 2001 271924 192703 15.161 13.916 0 0 10 1 8 10 1 2 ORF02305 TIGR4 10392 1 1 399 1.08983871046083 1.08775509229279 1.06807567476666 1.08322862798611 1.0813034491352 "YES" 163 2 2 10 "PTS system, lactose-specific IIBC components" "SP0478" 5400 5480 100 2155 2242 742 337 363 207 98 98 0 2277 2309 739 405 439 490 98 91 0 0.971 1.001 0.959 0.995 1.674 0.786 0.572 80 560 3690 3809 -0.042 1818 1872 1905 1904 179374 184699 9.077 3.816 0 0 10 2 9 10 1 2 ORF00446 TIGR4 8867 1 1 433 0.668921231262623 0.714463810620136 0.674759270158914 0.680867015063914 0.562106158082187 "YES" 164 2 3 10 "branched-chain amino acid ABC transporter, ATP-binding protein" "SP0752" 5650 5480 110 32635 31036 8826 340 436 480 100 100 0 36514 35417 10093 402 484 392 100 100 0 0.894 0.877 0.856 0.870 1.218 0.877 0.965 80 656 68407 65711 -0.161 32295 36112 30696 35015 2482854 2833333 63.750 89.115 0 0 10 3 10 10 1 2 ORF00782 TIGR4 9137 1 1 444 0.61587598429329 0.625958803110749 0.602287732279489 0.595330957895081 0.627184606409768 "YES" 165 2 4 10 "6-phospho-beta-glucosidase" "SP0578" 5910 5480 100 3421 3456 1060 343 374 211 100 100 0 2979 3056 1115 403 427 154 100 100 0 1.195 1.173 1.214 1.221 1.459 1.127 0.827 80 560 5654 5766 0.257 3078 2576 3113 2653 276492 244455 14.607 17.071 0 0 10 4 11 10 1 2 ORF00568 TIGR4 8964 1 1 450 0.82323467699159 0.837228821036383 0.85417909694778 0.835516206425165 0.805971552364662 "YES" 166 2 5 10 "DNA-binding response regulator" "SP1633" 6180 5480 120 11428 10746 4103 332 362 196 100 100 0 6708 6273 2582 411 422 136 99 97 0 1.762 1.777 1.775 1.919 1.620 1.762 0.927 120 820 17393 16276 0.817 11096 6297 10414 5862 1289507 752784 52.980 43.022 0 0 10 5 12 10 1 2 ORF01838 TIGR4 10012 1 1 459 1.21384058649304 1.26833385761437 1.24890271588329 1.31314954965593 1.26009039509009 "YES" 167 2 6 10 "IS66 family element, Orf3, degenerate" "SP0644" 6440 5480 110 2601 2609 645 326 361 192 100 100 0 1979 2044 665 400 425 175 100 98 0 1.441 1.389 1.422 1.456 1.513 1.342 0.748 80 650 3854 3927 0.527 2275 1579 2283 1644 208688 163512 11.708 9.251 0 0 10 6 13 10 1 2 ORF00652 TIGR4 9029 1 1 507 0.992703907568939 0.991398834117252 1.00052938703438 0.996323993902572 0.959728325885871 "YES" 168 2 7 10 "hypothetical protein" "SP1134" 6690 5470 160 388 437 233 335 364 196 31 9 0 381 401 153 399 416 147 16 4 0 -2.944 51.000 1.661 1.709 3.576 7.220 0.006 208 1308 35 104 Error 53 -18 102 2 90909 83457 0.372 -0.102 -50 0 10 7 14 10 1 2 ORF01236 TIGR4 9516 1 1 517 -1 -1 -1 -1 -1 "NO" 169 2 1 11 "exoribonuclease, VacB/Rnb family" "SP0975" 5130 5740 100 18887 18091 5446 336 431 455 100 100 0 12261 11703 3477 409 448 233 100 100 0 1.565 1.572 1.572 1.572 1.311 1.608 0.910 80 560 30403 29049 0.646 18551 11852 17755 11294 1447299 936274 38.813 48.305 0 0 11 1 8 11 1 2 ORF01050 TIGR4 9358 1 1 525 1.0781274221689 1.12201509519965 1.10607046161607 1.07570145495525 1.14995763638188 "YES" 170 2 2 11 "jag protein, putative" "SP2040" 5400 5740 120 28244 25919 11213 337 375 235 100 99 0 33819 30661 13801 399 431 174 100 98 0 0.835 0.845 0.844 0.911 1.772 0.833 0.955 120 820 61327 55844 -0.260 27907 33420 25582 30262 3110318 3679365 108.698 173.736 0 0 11 2 9 11 1 2 ORF02334 TIGR4 10415 1 1 536 0.575230924927178 0.603118801172842 0.593844446312954 0.623386784646458 0.595718103921707 "YES" 171 2 3 11 "toxin secretion ABC transporter, ATP-binding/permease protein" "SP1953" 5650 5740 100 5258 5169 1963 353 391 246 100 100 0 5470 5553 1898 406 438 181 100 100 0 0.969 0.936 0.987 0.910 1.500 0.941 0.851 80 560 9969 9963 -0.046 4905 5064 4816 5147 413499 444217 19.423 28.260 0 0 11 3 10 11 1 2 ORF02231 TIGR4 10329 1 1 437 0.667543432640043 0.668070056683764 0.694460270747495 0.622702496189108 0.672954064574221 "YES" 172 2 4 11 "conserved hypothetical protein" "SP2144" 5920 5740 100 1523 1597 563 344 369 228 97 93 0 960 1012 399 395 415 143 87 80 0 2.087 2.031 2.184 2.107 2.376 2.261 0.406 80 560 1744 1870 1.061 1179 565 1253 617 127771 80964 5.386 4.175 0 0 11 4 11 11 1 2 ORF02477 TIGR4 10518 1 1 445 1.4377328626623 1.4496263729965 1.53667804590935 1.44179577963786 1.61694913921606 "YES" 173 2 5 11 "conserved hypothetical protein" "SP1004" 6180 5740 100 2981 3053 975 351 389 236 100 100 0 3551 3610 1377 414 449 308 100 98 0 0.838 0.845 0.846 0.880 1.702 0.774 0.699 80 560 5767 5898 -0.254 2630 3137 2702 3196 244210 288787 11.288 10.263 0 0 11 5 12 11 1 2 ORF01087 TIGR4 9387 1 1 452 0.577297622861048 0.603118801172842 0.59525166064071 0.602173842468588 0.553524384676352 "YES" 174 2 6 11 "transcriptional regulator, authentic frameshift" "SP2123" 6450 5740 110 25475 23657 6043 360 444 483 100 100 0 24223 22879 6676 411 480 425 100 100 0 1.055 1.037 1.030 1.072 1.349 0.997 0.945 80 656 48927 45765 0.077 25115 23812 23297 22468 1892534 1830282 48.060 52.704 0 0 11 6 13 11 1 2 ORF02446 TIGR4 10497 1 1 460 0.726788773410986 0.740158812800281 0.724715378794245 0.733557226279916 0.713002340468118 "YES" 175 2 7 11 "licD2 protein" "SP1274" 6690 5740 100 11594 10960 3187 373 401 228 100 100 0 10719 10163 2754 416 430 155 100 100 0 1.089 1.086 1.127 1.082 1.377 1.092 0.914 80 560 21524 20334 0.123 11221 10303 10587 9747 876831 813051 46.311 62.794 0 0 11 7 14 11 1 2 ORF01399 TIGR4 9655 1 1 512 0.750211349994847 0.7751325657677 0.792965273690402 0.740400110853422 0.780941379930977 "YES" 176 2 1 12 "oxidoreductase, short chain dehydrogenase/reductase family" "SP1909" 5140 6000 100 29448 28143 7889 335 404 335 100 100 0 28591 26679 7888 417 474 281 100 100 0 1.033 1.059 1.061 1.069 1.260 1.049 0.944 80 560 57287 54070 0.047 29113 28174 27808 26262 2251449 2134328 82.803 93.256 0 0 12 1 8 12 1 2 ORF02179 TIGR4 10285 1 1 519 0.711632988562605 0.755861314132591 0.74652720087446 0.731504360907864 0.750190025226735 "YES" 177 2 2 12 "oxidoreductase, short chain dehydrogenase/reductase family" "SP0793" 5410 5990 110 35198 31911 10162 345 457 601 100 100 0 26080 24662 7068 404 478 368 100 100 0 1.357 1.301 1.304 1.265 1.308 1.344 0.946 80 656 60529 55824 0.441 34853 25676 31566 24258 2552867 1972978 52.336 65.717 0 0 12 2 9 12 1 2 ORF00828 TIGR4 9178 1 1 528 0.934836365420576 0.928588828788009 0.917503741696792 0.865624898548594 0.96115862145351 "YES" 178 2 3 12 "glucosamine--fructose-6-phosphate aminotransferase, isomerizing" "SP0266" 5660 5990 110 9251 8585 2647 366 397 228 100 100 0 65535 62975 7444 416 682 2054 100 100 86 0.136 0.131 0.139 0.121 1.535 0.124 0.858 80 656 74004 70778 -2.874 8885 65119 8219 62559 686797 5038030 35.912 30.328 0 0 12 3 10 12 1 2 ORF00195 TIGR4 8657 1 1 537 0.0936903063354446 0.0935012579333045 0.0978013957790292 0.0827989033394308 0.0886783251936274 "YES" 179 2 4 12 "conserved domain protein" "SP1175" 5920 5990 110 33781 31570 11298 335 386 286 100 100 0 31783 29200 8886 423 470 239 100 100 0 1.067 1.085 1.084 1.010 1.428 1.111 0.958 80 656 64806 60012 0.093 33446 31360 31235 28777 2525577 2335960 109.035 120.209 0 0 12 4 11 12 1 2 ORF01281 TIGR4 9557 1 1 604 0.735055565146466 0.774418815707141 0.762710165643652 0.691131341924174 0.794529187823549 "YES" 180 2 5 12 "DNA ligase, NAD-dependent" "SP1117" 6180 5990 100 24465 22401 7711 332 393 312 100 100 0 40821 38872 11470 425 514 410 100 100 0 0.597 0.574 0.577 0.539 1.451 0.578 0.950 80 560 64529 60516 -0.743 24133 40396 22069 38447 1792072 3109797 70.538 93.556 0 0 12 5 12 12 1 2 ORF01214 TIGR4 9499 1 1 625 0.41127288884015 0.409692534761197 0.405981333557553 0.36883147851201 0.413355419047715 "YES" 181 2 6 12 "DNA mismatch repair protein HexB" "SP0173" 6440 5990 110 65535 59153 15839 330 477 755 100 100 71 53035 49097 14000 434 506 373 100 100 3 1.240 1.209 1.186 1.140 1.495 1.245 0.928 80 656 117806 107486 0.310 65205 52601 58823 48663 4732259 3927758 77.717 130.271 0 0 12 6 13 12 1 2 ORF00084 TIGR4 8564 1 1 653 0.854235145999642 0.862923823216528 0.834478096359199 0.780088841379761 0.890358990855373 "YES" 182 2 7 12 "ribose-phosphate pyrophosphokinase" "SP0027" 6700 5990 110 65535 60860 14881 348 505 799 100 100 85 65535 63614 7271 428 687 2014 100 100 91 1.001 0.958 1.001 0.881 1.552 0.961 0.883 80 656 130294 123698 0.002 65187 65107 60512 63186 4868782 5089137 75.538 31.245 0 0 12 7 14 12 1 2 ORF02626 TIGR4 10639 1 1 679 0.689588210601324 0.683772558016074 0.704310771041786 0.602858130925938 0.687257020250613 "YES" 183 2 1 13 "ABC transporter, ATP-binding protein" "SP1435" 5140 6260 100 14504 14236 4423 315 365 238 100 100 0 9023 8329 2998 432 452 164 98 97 0 1.652 1.763 1.766 1.950 1.580 1.741 0.932 80 560 22780 21818 0.724 14189 8591 13921 7897 1138849 666344 58.282 48.030 0 0 13 1 8 13 1 2 ORF01601 TIGR4 9815 1 1 943 1.13806166225114 1.25834135676653 1.24257025140839 1.3343624918338 1.24507229162988 "YES" 184 2 2 13 "rod shape-determining protein MreC" "SP2218" 5400 6250 110 24306 23866 3417 337 607 1338 100 100 0 32893 33632 4770 419 643 1110 100 100 0 0.738 0.708 0.723 0.704 1.243 0.680 0.915 80 656 56443 56742 -0.438 23969 32474 23529 33213 1909305 2690551 17.383 29.720 0 0 13 2 9 13 1 2 ORF02567 TIGR4 10590 1 1 340 0.508407691732045 0.50533504287618 0.508707979483727 0.48173907397487 0.486300492997312 "YES" 185 2 3 13 "Hypothetical protein" "NTL02SP0419" 5670 6250 110 2532 2595 857 327 357 226 100 98 0 2452 2412 523 411 451 210 100 100 0 1.080 1.133 1.036 1.079 1.707 1.221 0.709 80 656 4246 4269 0.112 2205 2041 2268 2001 207596 192990 9.903 9.338 0 0 13 3 10 13 1 2 NTORFA0419 R6 11705 1 1 100 0.744011256193236 0.808678818614 0.728937021777513 0.73834724548137 0.873195444043703 "YES" 186 2 4 13 "Conserved hypothetical protein" "NTL02SP0970" 5920 6250 110 1839 1834 507 321 345 181 98 98 0 2118 2104 481 413 436 169 100 100 0 0.890 0.895 0.889 0.867 1.625 0.929 0.718 80 656 3223 3204 -0.168 1518 1705 1513 1691 146711 168304 8.227 9.870 0 0 13 4 11 13 1 2 NTORFA0970 R6 11716 1 1 435 0.61312038704813 0.638806304200821 0.62550676868746 0.593278092523029 0.664372291168386 "YES" 187 2 5 13 "arginyl-tRNA synthetase" "SP2078" 6180 6250 110 65535 59704 15055 339 472 590 100 100 76 65535 62414 8474 422 549 558 100 100 78 1.001 0.958 1.001 0.891 1.462 0.963 0.930 80 656 130309 121357 0.002 65196 65113 59365 61992 4776335 4993106 100.393 110.869 0 0 13 5 12 13 1 2 ORF02382 TIGR4 10453 1 1 612 0.689588210601324 0.683772558016074 0.704310771041786 0.609701015499445 0.688687315818252 "YES" 188 2 6 13 "glycosyl transferase, group 1" "SP1758" 6440 6250 110 29087 26976 8660 336 409 360 100 100 0 31193 29747 7705 416 501 406 100 100 0 0.934 0.908 0.896 0.853 1.375 0.931 0.958 80 656 59528 55971 -0.098 28751 30777 26640 29331 2158073 2379751 73.797 72.034 0 0 13 6 13 13 1 2 ORF01994 TIGR4 10136 1 1 628 0.643431956744892 0.648085054988096 0.630432018834605 0.583698054120119 0.665802586736026 "YES" 189 2 7 13 "sugar ABC transporter, sugar-binding protein" "SP1897" 6700 6250 100 5456 5273 1576 316 362 205 100 98 0 5464 5400 1662 409 445 184 100 100 0 1.017 0.993 0.949 0.965 1.463 0.976 0.900 80 560 10195 9948 0.024 5140 5055 4957 4991 421812 431992 23.956 26.929 0 0 13 7 14 13 1 2 ORF02163 TIGR4 10273 1 1 657 0.700610599581964 0.70875381013566 0.667723198520134 0.660338361343394 0.697984237007906 "YES" 190 2 1 14 "glucokinase" "SP0668" 5140 6520 110 65535 62064 9470 329 470 582 100 100 73 65535 57609 15097 418 517 491 100 100 53 1.001 1.079 1.001 1.172 1.505 1.058 0.968 80 656 130323 118926 0.002 65206 65117 61735 57191 4965101 4608681 105.832 116.277 0 0 14 1 8 14 1 2 ORF00683 TIGR4 9053 1 1 684 0.689588210601324 0.770136315343783 0.704310771041786 0.801986072014982 0.756626355281112 "YES" 191 2 2 14 "Tn5252, relaxase" "SP1056" 5400 6520 110 1299 1332 516 308 336 185 97 90 0 1094 1134 395 414 431 192 90 78 0 1.457 1.422 1.435 1.340 2.158 1.599 0.480 80 656 1671 1744 0.543 991 680 1024 720 106581 90717 5.384 3.661 0 0 14 2 9 14 1 2 ORF01146 TIGR4 9439 1 1 989 1.00372629654958 1.01495258611572 1.0096762801648 0.916946532849895 1.1435213063275 "YES" 192 2 3 14 "signal peptidase I" "SP0402" 5660 6510 110 35258 33772 6429 345 652 1554 100 100 0 26898 26500 3526 412 760 2811 100 100 0 1.318 1.281 1.289 1.252 1.218 1.308 0.960 80 656 61399 59515 0.399 34913 26486 33427 26088 2701758 2119998 21.313 9.157 0 0 14 3 10 14 1 2 ORF00352 TIGR4 8791 1 1 402 0.907969292280265 0.914313827576818 0.906949634238623 0.856729148603036 0.935413301236006 "YES" 193 2 4 14 "Hypothetical protein" "NTL02SP1212" 5930 6510 110 3889 3911 1043 331 387 309 100 100 0 5696 5855 1499 429 484 346 100 100 0 0.676 0.660 0.636 0.656 1.364 0.650 0.862 80 656 8825 9006 -0.566 3558 5267 3580 5426 312907 468398 11.405 15.523 0 0 14 4 11 14 1 2 NTORFA1212 R6 11726 1 1 123 0.465695934432063 0.471075039969321 0.447494156226349 0.448893228022038 0.464846059482725 "YES" 194 2 5 14 "Hypothetical protein" "NTL02SP0968" 6190 6510 110 1519 1528 479 332 361 203 98 97 0 1806 1874 628 412 439 197 100 100 0 0.852 0.818 0.902 0.832 1.787 0.888 0.573 80 642 2581 2658 -0.232 1187 1394 1196 1462 122262 149953 5.749 7.284 0 0 14 5 12 14 1 2 NTORFA0968 R6 11714 1 1 542 0.586942213219109 0.583847549537734 0.634653661817873 0.569327996515755 0.635051232031784 "YES" 195 2 6 14 "Empty" "Empty" 6430 6510 160 317 335 201 326 364 261 9 2 0 418 453 267 409 453 355 3 0 0 -1.000 0.205 1.263 1.216 4.468 1.509 0.004 208 1234 0 53 Error -9 9 9 44 69737 94142 -0.111 0.000 -75 0 14 6 13 14 1 2 Empty Empty 0 0 0 0 -1 -1 -1 -1 -1 "NO" 196 2 7 14 "Empty" "Empty" 6690 6510 160 320 340 181 326 354 193 15 4 0 397 412 146 413 437 164 11 3 0 0.375 -14.000 1.303 1.300 4.441 15.000 0.001 208 1258 -22 13 -1.415 -6 -16 14 -1 70729 85774 -0.073 -0.152 -75 0 14 7 14 14 1 2 Empty Empty 0 0 0 0 -1 -1 -1 -1 -1 "NO" 197 3 1 1 "type II restriction endonuclease, putative" "SP1037" 7380 3140 110 2271 2310 530 439 469 231 100 100 0 2288 2524 1277 442 451 150 100 100 0 0.992 0.899 0.975 0.960 1.646 0.727 0.531 80 656 3678 3953 -0.011 1832 1846 1871 2082 184799 201936 7.970 13.820 0 0 1 1 15 1 1 3 ORF01124 TIGR4 9420 1 0 100 0.683388116799714 0.641661304443059 0.68601698478096 0.656916919056641 0.519912438836832 "YES" 198 3 2 1 "hypothetical protein" "SP0367" 7640 3140 130 1993 2040 561 423 452 227 100 99 0 1036 1141 569 421 443 153 90 81 0 2.553 2.246 2.472 2.649 2.158 2.276 0.404 120 918 2185 2337 1.352 1570 615 1617 720 244839 136945 6.996 4.562 0 0 1 2 16 1 1 3 ORF00311 TIGR4 8756 1 0 100 1.75875994172346 1.60308263601681 1.73931690910619 1.81268012352192 1.62767635597336 "YES" 199 3 3 1 "ribosomal protein L35" "SP0960" 7900 3140 120 12642 11921 5065 437 477 276 100 100 0 22772 21038 9401 413 449 214 100 99 0 0.546 0.557 0.559 0.595 1.592 0.539 0.930 120 820 34564 32109 -0.873 12205 22359 11484 20625 1430505 2524619 41.464 96.210 0 0 1 3 17 1 1 3 ORF01035 TIGR4 9344 1 0 103 0.376139023964358 0.397558783731684 0.39331640460775 0.407151632123647 0.385464655478752 "YES" 200 3 4 1 "IS630-Spn1, transposase Orf1" "SP0299" 8160 3140 120 17244 16252 7070 439 512 388 100 100 0 11666 10900 4765 430 471 262 100 99 0 1.496 1.510 1.533 1.553 1.508 1.516 0.940 120 814 28041 26283 0.581 16805 11236 15813 10470 1950272 1308002 40.567 39.805 0 0 1 4 18 1 1 3 ORF00234 TIGR4 8690 1 0 104 1.03059336968989 1.07776259144496 1.07862978222483 1.06269997426559 1.08416404027048 "YES" 201 3 5 1 "hypothetical protein" "SP2005" 8420 3150 130 9874 8889 3846 434 505 385 100 100 0 1097 1122 418 423 459 245 88 64 0 14.006 12.096 12.486 12.052 2.003 13.510 0.564 120 913 10114 9154 3.808 9440 674 8455 699 1066691 134611 21.777 2.706 0 0 1 5 19 1 1 3 ORF02292 TIGR4 10381 1 0 125 9.64872375392821 8.63352073252864 8.78523904817956 8.24704448799024 9.66164655940247 "YES" 202 3 6 1 "bacteriocin BlpM" "SP0539" 8680 3140 130 1864 1868 506 433 468 263 99 98 0 951 1032 537 424 446 149 86 75 0 2.715 2.360 2.750 3.024 2.644 2.506 0.325 120 912 1958 2043 1.441 1431 527 1435 608 224181 123877 5.323 3.933 0 0 1 6 20 1 1 3 ORF00519 TIGR4 8927 0 0 134 1.87036163015244 1.6844501429206 1.93491970066425 2.06928829502842 1.79216034625186 "YES" 203 3 7 1 "hypothetical protein" "SP0142" 8930 3140 110 5145 5246 1368 438 487 297 100 100 0 3181 3292 895 420 459 227 100 100 0 1.705 1.674 1.669 1.683 1.377 1.699 0.831 80 656 7468 7680 0.770 4707 2761 4808 2872 419716 263346 16.024 12.480 0 0 1 7 21 1 1 3 ORF00046 TIGR4 8533 1 1 145 1.17457332574951 1.19481760137673 1.17432035651223 1.15165747372117 1.21503608470946 "YES" 204 3 1 2 "hypothetical protein" "SP0125" 7380 3400 160 1707 1732 556 433 461 228 98 95 0 886 1048 877 423 451 174 77 61 0 2.752 2.078 2.509 2.724 2.700 1.543 0.181 208 1240 1737 1924 1.460 1274 463 1299 625 360176 217992 5.575 3.431 0 0 2 1 15 2 1 3 ORF00028 TIGR4 8517 1 0 159 1.89585090467017 1.4831726258428 1.76535037416967 1.86400175782322 1.10347303043361 "YES" 205 3 2 2 "hypothetical protein" "SP1455" 7640 3400 140 3120 2948 1186 434 469 242 98 95 0 2003 2003 1003 416 445 179 94 86 0 1.693 1.584 1.740 1.733 2.036 1.532 0.706 156 1016 4273 4101 0.759 2686 1587 2514 1587 459932 312409 10.244 8.704 0 0 2 2 16 2 1 3 ORF01626 TIGR4 9835 1 0 100 1.16630653401403 1.13058009592637 1.22427646514756 1.18587189658871 1.09560640481159 "YES" 206 3 3 2 "hypothetical protein" "SP0147" 7910 3400 120 2597 2576 660 405 443 232 100 100 0 1437 1502 606 419 437 153 98 91 0 2.153 2.005 2.234 2.261 1.810 1.944 0.622 120 814 3210 3254 1.107 2192 1018 2171 1083 309148 180238 9.194 6.961 0 0 2 3 17 2 1 3 ORF00053 TIGR4 8538 1 0 101 1.48320021720744 1.43106887142195 1.57185840410325 1.54717620206986 1.39024729174526 "YES" 207 3 4 2 "hypothetical protein" "SP1209" 8170 3400 140 1945 1891 660 427 461 238 98 92 0 1117 1247 755 422 443 178 83 74 0 2.184 1.775 2.129 2.247 2.294 1.611 0.433 156 1036 2213 2289 1.127 1518 695 1464 825 295059 194605 6.008 4.517 0 0 2 4 18 2 1 3 ORF01323 TIGR4 9591 1 0 103 1.50455609585743 1.26690635749325 1.49797965189607 1.53759616366695 1.15210307973334 "YES" 208 3 5 2 "hypothetical protein" "SP0003" 8430 3400 130 2921 2902 821 441 475 245 100 100 0 2366 2443 1057 412 445 200 98 95 0 1.269 1.212 1.336 1.333 1.663 1.130 0.723 120 883 4434 4492 0.344 2480 1954 2461 2031 348268 293212 9.906 9.990 0 0 2 5 19 2 1 3 ORF02594 TIGR4 10615 1 0 105 0.874213226027053 0.865065073398207 0.940019170940885 0.91215651364844 0.808116995716121 "YES" 209 3 6 2 "IS3-Spn1, hypothetical protein, authentic point mutation" "SP0393" 8680 3400 140 2061 2079 621 417 454 239 100 98 0 1181 1322 776 415 439 186 89 78 0 2.146 1.832 2.092 2.194 2.129 1.659 0.398 156 1036 2410 2569 1.102 1644 766 1662 907 324352 206268 6.799 4.747 0 0 2 6 20 2 1 3 ORF00342 TIGR4 8782 1 0 128 1.47837792202841 1.30759011094514 1.47194618683258 1.50132887542736 1.18643017335668 "YES" 210 3 7 2 "hypothetical protein" "SP0997" 8940 3400 130 2589 2540 814 401 431 224 99 97 0 1366 1437 654 425 446 156 95 88 0 2.325 2.114 2.217 2.411 2.009 2.134 0.601 120 924 3129 3151 1.217 2188 941 2139 1012 304805 172410 9.415 6.353 0 0 2 7 21 2 1 3 ORF01079 TIGR4 9380 1 0 138 1.60169089874933 1.50886762802294 1.55989708231732 1.64981947067246 1.52612537067098 "YES" 211 3 1 3 "hypothetical protein" "SP0772" 7380 3660 130 2495 2556 784 430 453 221 100 98 0 1409 1472 754 428 445 153 95 93 0 2.105 2.036 2.299 2.251 1.818 1.951 0.587 120 914 3046 3170 1.074 2065 981 2126 1044 306774 176620 9.516 6.712 0 0 3 1 15 3 1 3 ORF00803 TIGR4 9157 1 0 146 1.45013305026552 1.4531951232993 1.61759286975531 1.54033331749635 1.39525332623199 "YES" 212 3 2 3 "hypothetical protein" "SP1146" 7650 3660 120 3996 3778 1222 433 461 231 100 97 0 4120 4055 1668 422 441 152 100 98 0 0.963 0.921 0.944 0.994 1.740 0.858 0.808 120 814 7261 6978 -0.054 3563 3698 3345 3633 453329 486543 14.359 23.776 0 0 3 2 16 3 1 3 ORF01249 TIGR4 9528 1 0 162 0.663410036772302 0.65736380577537 0.664205162700745 0.680182726606564 0.613596798517196 "YES" 213 3 3 3 "conserved hypothetical protein" "SP0783" 7900 3660 110 11812 11571 2220 441 518 359 100 100 0 3906 3939 778 425 452 181 100 100 0 3.267 3.167 3.272 3.160 1.331 3.330 0.876 80 656 14852 14644 1.708 11371 3481 11130 3514 925719 315147 30.788 19.265 0 0 3 3 17 3 1 3 ORF00816 TIGR4 9168 1 0 252 2.25063404998454 2.26044644179218 2.30220264020851 2.16235152522811 2.38144212011919 "YES" 214 3 4 3 "conserved hypothetical protein" "SP0471" 8160 3660 120 4384 4232 1367 400 437 223 100 100 0 2816 2815 1286 407 422 136 97 96 0 1.654 1.591 1.614 1.727 1.838 1.522 0.714 120 814 6393 6240 0.726 3984 2409 3832 2408 507784 337767 17.018 17.596 0 0 3 4 18 3 1 3 ORF00439 TIGR4 8860 1 1 253 1.13943946087372 1.13557634635029 1.13562196249894 1.1817661658446 1.08845492697339 "YES" 215 3 5 3 "preprotein translocase, YajC subunit" "SP2029" 8410 3660 110 17315 17132 4242 443 630 1009 100 100 0 14021 14005 2841 433 562 764 100 100 0 1.242 1.230 1.256 1.202 1.283 1.226 0.925 80 656 30460 30261 0.312 16872 13588 16689 13572 1370543 1120436 16.355 17.596 0 0 3 5 19 3 1 3 ORF02321 TIGR4 10404 1 1 254 0.855612944622222 0.877912574488279 0.883730597830652 0.822514725735502 0.8767711829628 "YES" 216 3 6 3 "conserved hypothetical protein" "SP1106" 8670 3660 110 20726 20715 4965 418 630 1144 100 100 0 25172 25300 5391 422 612 1078 100 100 0 0.821 0.816 0.828 0.800 1.253 0.820 0.944 80 656 45058 45175 -0.285 20308 24750 20297 24878 1657237 2023999 17.557 22.902 0 0 3 6 20 3 1 3 ORF01202 TIGR4 9488 1 1 256 0.565586334569118 0.582420049416614 0.582586731690908 0.547430765880534 0.586421182732052 "YES" 217 3 7 3 "ribosomal protein L22" "SP0214" 8930 3660 110 16853 16046 4349 423 599 1075 100 98 0 19576 19087 4445 435 588 1038 100 100 0 0.858 0.838 0.829 0.813 1.343 0.845 0.924 80 656 35571 34275 -0.220 16430 19141 15623 18652 1283691 1526942 14.369 17.822 0 0 3 7 21 3 1 3 ORF00130 TIGR4 8605 1 1 266 0.591075609086849 0.598122550748925 0.583290338854786 0.556326515826093 0.604299877327542 "YES" 218 3 1 4 "ABC transporter, substrate-binding protein" "SP1690" 7380 3920 110 3040 3048 863 417 470 294 100 100 0 1290 1420 687 428 442 158 97 93 0 3.043 2.652 2.950 2.863 1.863 2.831 0.485 80 656 3485 3623 1.605 2623 862 2631 992 243854 113566 8.769 6.190 0 0 4 1 15 4 1 3 ORF01909 TIGR4 10069 1 1 268 2.09632060425557 1.892865160604 2.07564113343983 1.95911785339496 2.02458337599322 "YES" 219 3 2 4 "phospho-2-dehydro-3-deoxyheptonate aldolase" "SP1700" 7630 3920 110 12658 12263 3094 435 554 699 100 100 0 13667 13589 3007 422 507 548 100 100 0 0.923 0.898 0.886 0.883 1.285 0.909 0.926 80 656 25468 24995 -0.116 12223 13245 11828 13167 981014 1087116 16.751 23.872 0 0 4 2 16 4 1 3 ORF01923 TIGR4 10079 1 1 270 0.635854064320701 0.6409475543825 0.623395947195826 0.604226707840639 0.650069335491995 "YES" 220 3 3 4 "ribosome-binding factor A" "SP0557" 7890 3920 110 5069 4937 1130 438 525 422 100 100 0 4651 4671 1220 416 470 305 100 100 0 1.094 1.057 1.060 1.061 1.389 0.994 0.789 80 656 8866 8754 0.129 4631 4235 4499 4255 394969 373655 10.455 13.774 0 0 4 3 17 4 1 3 ORF00540 TIGR4 8943 1 1 273 0.753655846551297 0.754433814011472 0.745823593710582 0.726030053249058 0.710856897116659 "YES" 221 3 4 4 "DNA-binding response regulator" "SP0661" 8160 3920 110 7849 7801 1469 414 469 297 100 100 0 4131 4300 854 405 427 163 100 100 0 1.995 1.897 1.959 1.898 1.329 1.989 0.869 80 656 11161 11282 0.997 7435 3726 7387 3895 624048 343999 24.687 23.761 0 0 4 4 18 4 1 3 ORF00675 TIGR4 9046 1 1 252 1.37435412602362 1.35398386488152 1.37836643403682 1.29877949205157 1.42242894201714 "YES" 222 3 5 4 "acylphosphatase" "SP1974" 8420 3920 120 2854 2735 940 396 432 234 99 98 0 1432 1470 709 414 445 322 90 76 0 2.415 2.215 2.292 2.357 1.974 2.271 0.532 120 820 3476 3395 1.272 2458 1018 2339 1056 328203 176357 9.842 3.183 0 0 4 5 19 4 1 3 ORF02256 TIGR4 10350 1 1 253 1.66369183676543 1.58095638413946 1.61266761960816 1.61286789397552 1.62410061705426 "YES" 223 3 6 4 "sodium:solute symporter family protein" "SP1328" 8690 3920 120 1584 1631 547 391 423 211 99 95 0 960 1035 491 402 429 246 79 59 0 2.138 1.959 2.202 2.204 2.435 2.053 0.383 120 820 1751 1873 1.096 1193 558 1240 633 195675 124245 5.725 2.463 0 0 4 6 20 4 1 3 ORF01464 TIGR4 9709 1 1 255 1.47286672753809 1.39823636863621 1.54934297485915 1.50817176000087 1.46819840018159 "YES" 224 3 7 4 "transcriptional regulator, GntR family" "SP1714" 8940 3920 110 15306 14983 3702 398 485 466 100 100 0 2310 2430 723 411 433 160 100 100 0 7.850 7.224 7.550 7.419 1.400 7.631 0.814 80 656 16807 16604 2.973 14908 1899 14585 2019 1198628 194418 31.112 12.481 0 0 4 7 21 4 1 3 ORF01937 TIGR4 10093 1 1 257 5.40785959362676 5.15613043748238 5.3122340872782 5.0767360650846 5.45729273832719 "YES" 225 3 1 5 "conserved hypothetical protein" "SP2209" 7380 4180 110 11459 11767 2170 416 493 349 100 100 0 7422 7502 1471 428 465 222 100 100 0 1.579 1.605 1.595 1.608 1.244 1.616 0.914 80 656 18037 18425 0.659 11043 6994 11351 7074 941359 600125 32.304 31.698 0 0 5 1 15 5 1 3 ORF02556 TIGR4 10581 1 1 267 1.08777201252696 1.14556884719812 1.12225342638526 1.10033583941987 1.15567881865244 "YES" 226 3 2 5 "conserved hypothetical protein" "SP1750" 7640 4180 110 18648 18775 3629 432 503 391 100 100 0 14916 15222 3021 421 487 328 100 100 0 1.257 1.239 1.210 1.238 1.230 1.276 0.920 80 656 32711 33144 0.330 18216 14495 18343 14801 1501991 1217738 46.731 44.924 0 0 5 2 16 5 1 3 ORF01983 TIGR4 10128 1 1 268 0.865946434291572 0.884336325033315 0.851364668292268 0.847149110200126 0.912528572153779 "YES" 227 3 3 5 "transcription-repair coupling factor" "SP0006" 7890 4180 110 8129 7888 1935 439 514 490 100 100 0 11248 11228 2400 412 494 485 100 100 0 0.710 0.689 0.700 0.676 1.350 0.680 0.879 80 656 18526 18265 -0.495 7690 10836 7449 10816 631045 898237 15.049 22.132 0 0 5 3 17 5 1 3 ORF02597 TIGR4 10618 1 1 271 0.489118511015924 0.491773791725548 0.492525014714535 0.462578997169051 0.486300492997312 "YES" 228 3 4 5 "ribosomal protein L13" "SP0294" 8150 4180 110 18034 18371 4686 438 621 1019 100 100 0 32676 33698 8260 436 676 1656 100 100 0 0.546 0.539 0.527 0.533 1.277 0.527 0.940 80 656 49836 51195 -0.874 17596 32240 17933 33262 1469653 2695817 17.419 19.941 0 0 5 4 18 5 1 3 ORF00229 TIGR4 8685 1 1 274 0.376139023964358 0.384711282641612 0.370800975363657 0.364725747767906 0.376882882072917 "YES" 229 3 5 5 "autoinducer-2 production protein" "SP0340" 8410 4180 110 9583 9653 1880 426 554 705 100 100 0 9153 9182 1917 428 510 499 100 100 0 1.050 1.054 1.035 1.058 1.264 1.050 0.922 80 656 17882 17981 0.070 9157 8725 9227 8754 772200 734563 12.906 17.379 0 0 5 5 19 5 1 3 ORF00280 TIGR4 8729 1 1 285 0.723344276854536 0.752292563829794 0.728233414613634 0.723977187877006 0.750905173010555 "YES" 230 3 6 5 "adenine phosphoribosyltransferase" "SP1577" 8670 4180 100 12016 11724 2769 432 584 825 100 100 0 12533 12518 3130 422 562 761 100 100 0 0.956 0.934 0.926 0.933 1.297 0.924 0.911 80 560 23695 23388 -0.064 11584 12111 11292 12096 937907 1001432 13.503 15.711 0 0 5 6 20 5 1 3 ORF01774 TIGR4 9957 1 1 287 0.658587741593272 0.666642556562645 0.651540233750943 0.638441130708173 0.660796552249288 "YES" 231 3 7 5 "hypothetical protein" "SP0781" 8950 4180 120 11572 10628 3779 385 421 226 100 100 0 8447 7587 3174 398 424 149 98 95 0 1.390 1.425 1.395 1.589 1.634 1.382 0.934 120 820 19236 17432 0.475 11187 8049 10243 7189 1275345 910408 45.164 48.074 0 0 5 7 21 5 1 3 ORF00813 TIGR4 9166 1 1 290 0.957570042693147 1.0170938362974 0.981531993609681 1.08733435873021 0.988334237238654 "YES" 232 3 1 6 "pyruvate kinase" "SP0897" 7390 4430 110 57125 54129 14557 429 726 1600 100 100 22 65535 62237 9899 429 835 3080 100 100 76 0.871 0.869 0.877 0.816 1.370 0.890 0.948 80 656 121802 115508 -0.200 56696 65106 53700 61808 4330290 4978956 33.377 19.936 0 0 6 1 15 6 1 3 ORF00957 TIGR4 9281 1 1 293 0.600031300133619 0.620248802626272 0.617063482720925 0.558379381198145 0.636481527599423 "YES" 233 3 2 6 "O-antigen transporter RfbX, putative" "SP0356" 7640 4440 120 44238 39358 18540 407 512 554 100 99 5 65535 56491 18087 409 527 782 100 100 72 0.673 0.695 0.698 0.627 1.539 0.714 0.868 120 820 108957 95033 -0.571 43831 65126 38951 56082 4722995 6778942 70.119 71.565 0 0 6 2 16 6 1 3 ORF00298 TIGR4 8745 1 1 308 0.463629236498193 0.496056292088906 0.49111780038678 0.429048862758869 0.510615517647177 "YES" 234 3 3 6 "potassium uptake protein, Trk family" "SP0078" 7900 4440 120 20371 18687 8384 408 470 376 100 99 0 13742 12545 5612 405 464 453 98 97 0 1.497 1.506 1.513 1.522 1.460 1.514 0.957 120 820 33300 30419 0.582 19963 13337 18279 12140 2242387 1505358 48.449 26.669 0 0 6 3 17 6 1 3 ORF02688 TIGR4 10688 1 1 312 1.03128226900118 1.07490759120272 1.06455763894727 1.04148703208772 1.08273374470284 "YES" 235 3 4 6 "IS1381, transposase OrfA, authentic frameshift" "SP1085" 8160 4440 120 16240 15277 7367 408 448 252 99 99 0 13035 12111 5669 406 432 160 100 99 0 1.254 1.270 1.281 1.280 1.559 1.279 0.947 120 820 28461 26574 0.326 15832 12629 14869 11705 1833199 1453359 58.845 72.994 0 0 6 4 18 6 1 3 ORF01175 TIGR4 9467 1 0 316 0.863879736357702 0.906462576910662 0.9013207769276 0.875889225408854 0.914674015505238 "YES" 236 3 5 6 "MutT/nudix family protein" "SP0740" 8420 4430 110 12878 12694 4554 412 484 333 100 100 0 12907 12835 4204 434 485 302 100 100 0 0.999 0.990 0.998 0.956 1.368 0.997 0.953 80 656 24939 24683 -0.001 12466 12473 12282 12401 1015541 1026768 36.667 40.894 0 0 6 5 19 6 1 3 ORF00765 TIGR4 9125 1 0 319 0.688210411978744 0.706612559953981 0.702199949550152 0.654179765227238 0.713002340468118 "YES" 237 3 6 6 "conserved hypothetical protein" "SP0434" 8690 4430 110 6218 5988 1486 410 456 283 100 100 0 5915 6387 3732 417 454 244 100 100 0 1.056 0.934 1.010 0.971 1.389 0.805 0.707 80 656 11306 11548 0.079 5808 5498 5578 5970 479077 510969 19.548 24.316 0 0 6 6 20 6 1 3 ORF00389 TIGR4 8823 1 1 286 0.727477672722276 0.666642556562645 0.710643235516687 0.664444092087498 0.575693965974759 "YES" 238 3 7 6 "conserved hypothetical protein" "SP0909" 8950 4430 110 17999 17047 3819 408 469 338 100 100 0 17988 17479 3024 405 466 275 100 100 0 1.000 0.975 0.998 0.951 1.323 0.974 0.942 80 656 35174 33713 0.001 17591 17583 16639 17074 1363783 1398281 49.047 61.865 0 0 6 7 21 6 1 3 ORF00974 TIGR4 9293 1 1 288 0.688899311290034 0.695906309045587 0.702199949550152 0.650758322940485 0.696553941440267 "YES" 239 3 1 7 "conserved hypothetical protein" "SP0721" 7390 4700 110 2790 2831 575 404 438 241 100 100 0 1728 1845 641 409 439 182 100 100 0 1.809 1.690 1.818 1.815 1.679 1.770 0.606 80 656 3705 3863 0.855 2386 1319 2427 1436 226485 147583 9.929 7.725 0 0 7 1 15 7 1 3 ORF00741 TIGR4 9106 1 1 291 1.24621885412367 1.20623760234568 1.27915782393004 1.24198355009146 1.26581157736065 "YES" 240 3 2 7 "v-type sodium ATP synthase, subunit C" "SP1319" 7640 4700 110 2164 2202 547 391 423 224 100 100 0 1426 1456 547 402 428 155 98 92 0 1.731 1.718 1.694 1.853 1.769 1.704 0.503 80 656 2797 2865 0.792 1773 1024 1811 1054 176162 116447 7.942 6.632 0 0 7 2 16 7 1 3 ORF01454 TIGR4 9700 1 1 294 1.19248470784305 1.22622260404135 1.19191053560918 1.26798651147079 1.21861182362856 "YES" 241 3 3 7 "MutT/nudix family protein" "SP1235" 7900 4700 110 7352 7217 1586 390 432 247 100 100 0 5591 5588 1203 404 427 155 100 100 0 1.342 1.317 1.329 1.315 1.285 1.316 0.909 80 656 12149 12011 0.425 6962 5187 6827 5184 577379 447028 27.470 33.297 0 0 7 3 17 7 1 3 ORF01353 TIGR4 9617 1 1 309 0.924502875751225 0.940008829756962 0.935093920793739 0.899839321416128 0.941134483506562 "YES" 242 3 4 7 "rod shpae-determining protein MreD, putative" "SP2217" 8160 4700 110 13524 13145 3503 374 444 325 100 100 0 18911 18389 5222 416 475 308 100 100 0 0.711 0.711 0.715 0.717 1.288 0.696 0.934 80 656 31645 30744 -0.492 13150 18495 12771 17973 1051573 1471102 39.080 58.162 0 0 7 4 18 7 1 3 ORF02566 TIGR4 10589 1 1 313 0.489807410327214 0.507476293057859 0.503079122172704 0.490634823920429 0.497742857538425 "YES" 243 3 5 7 "choline transporter" "SP1860" 8410 4700 110 29529 28501 9899 421 651 1362 100 100 0 19274 19033 6113 421 553 719 100 100 0 1.544 1.509 1.529 1.490 1.230 1.537 0.964 80 656 47961 46692 0.627 29108 18853 28080 18612 2280099 1522622 20.448 25.702 0 0 7 5 19 7 1 3 ORF02118 TIGR4 10236 1 1 317 1.06366053663181 1.0770488413844 1.07581535356932 1.01958980145249 1.09918214373069 "YES" 244 3 6 7 "single-strand binding protein" "SP1540" 8680 4700 110 9053 9187 2596 413 452 278 100 100 0 10557 10229 3378 401 439 195 100 100 0 0.851 0.893 0.923 0.905 1.279 0.863 0.917 80 656 18796 18602 -0.233 8640 10156 8774 9828 734930 818284 31.421 50.205 0 0 7 6 20 7 1 3 ORF01727 TIGR4 9920 1 1 321 0.586253313907819 0.637378804079702 0.649429412259309 0.619281053902354 0.617172537436294 "YES" 245 3 7 7 "S-adenosylmethionine synthetase" "SP0762" 8950 4700 120 36190 33091 14904 380 420 242 100 100 0 22597 21382 10540 415 441 164 99 99 0 1.614 1.560 1.554 1.683 1.581 1.527 0.976 120 820 57992 53678 0.691 35810 22182 32711 20967 3970928 2565893 135.004 127.689 0 0 7 7 21 7 1 3 ORF00793 TIGR4 9147 1 1 341 1.11188348842211 1.11345009447294 1.09340553266627 1.15165747372117 1.09203066589249 "YES" 246 3 1 8 "IS1167, transposase, interruption" "SP1905" 7380 4960 100 9743 9608 2807 404 449 255 100 100 0 11918 11755 3160 415 442 179 100 100 0 0.812 0.812 0.800 0.802 1.287 0.802 0.915 80 560 20842 20544 -0.301 9339 11503 9204 11340 768669 940374 35.918 63.201 0 0 8 1 15 8 1 3 ORF02173 TIGR4 10281 1 1 345 0.559386240767507 0.579565049174376 0.562885731102326 0.548799342795235 0.5735485226233 "YES" 247 3 2 8 "conserved hypothetical protein" "SP1069" 7630 4960 110 8599 8390 2900 375 470 456 100 98 0 14569 13958 4597 412 485 428 100 100 0 0.581 0.592 0.589 0.576 1.354 0.584 0.916 80 656 22381 21561 -0.784 8224 14157 8015 13546 671202 1116659 17.368 31.479 0 0 8 2 16 8 1 3 ORF01158 TIGR4 9451 1 1 349 0.40025049985951 0.422540035851269 0.414424619524088 0.394150151433984 0.417646305750632 "YES" 248 3 3 8 "type II DNA modification methyltransferase, putative" "SP1431" 7900 4960 110 10120 10379 3460 388 456 315 100 100 0 8090 7923 2696 397 439 195 100 100 0 1.265 1.328 1.318 1.349 1.366 1.335 0.909 80 656 17425 17517 0.339 9732 7693 9991 7526 830352 633834 31.502 38.379 0 0 8 3 17 8 1 3 ORF01597 TIGR4 9811 1 1 355 0.871457628781893 0.947860080423118 0.927354241991083 0.923105128966051 0.954722291399134 "YES" 249 3 4 8 "conserved hypothetical protein TIGR00045" "SP1126" 8160 4960 120 2777 2783 1050 346 388 214 100 99 0 2693 2642 1193 389 414 143 99 96 0 1.055 1.082 1.109 1.170 1.776 1.035 0.745 120 820 4735 4690 0.077 2431 2304 2437 2253 333992 317034 11.192 15.580 0 0 8 4 18 8 1 3 ORF01225 TIGR4 9508 1 1 379 0.726788773410986 0.772277565525462 0.7803003447406 0.800617495100281 0.740177956253261 "YES" 250 3 5 8 "transcriptional regulator, biotin repressor family" "SP1234" 8420 4960 100 16543 16619 5311 400 448 306 100 100 0 13804 13332 3878 405 451 202 100 100 0 1.205 1.255 1.241 1.252 1.323 1.275 0.932 80 560 29542 29146 0.269 16143 13399 16219 12927 1329508 1066564 52.846 63.767 0 0 8 5 19 8 1 3 ORF01352 TIGR4 9616 1 1 386 0.830123670104491 0.895756326002269 0.873176490372484 0.856729148603036 0.91181342436996 "YES" 251 3 6 8 "ABC transporter, ATP-binding protein" "SP2196" 8680 4960 100 5184 5192 1335 367 416 256 100 100 0 5744 5889 1609 403 427 166 100 100 0 0.902 0.880 0.885 0.884 1.383 0.850 0.853 80 560 10158 10311 -0.149 4817 5341 4825 5486 415382 471127 18.656 32.904 0 0 8 6 20 8 1 3 ORF02542 TIGR4 10568 1 1 393 0.62138717878361 0.628100053292427 0.622692340031948 0.60491099629799 0.60787561624664 "YES" 252 3 7 8 "ribosomal protein L2" "SP0212" 8950 4950 110 18745 17246 6086 387 453 347 100 100 0 23077 21870 7275 416 467 287 100 100 0 0.810 0.786 0.758 0.770 1.266 0.787 0.945 80 656 41019 38313 -0.304 18358 22661 16859 21454 1379656 1749587 48.395 74.575 0 0 8 7 21 8 1 3 ORF00127 TIGR4 8603 1 1 398 0.558008442144927 0.561007547599827 0.533334230219454 0.526902112160014 0.562821305866007 "YES" 253 3 1 9 "ATP synthase F1, delta subunit" "SP1511" 7390 5220 120 65150 52745 17797 377 429 358 100 100 48 53715 47960 20065 407 450 311 100 100 38 1.215 1.101 1.001 1.204 1.606 1.072 0.941 120 820 118081 99921 0.281 64773 53308 52368 47553 6329438 5755157 146.134 152.765 0 0 9 1 15 9 1 3 ORF01691 TIGR4 9891 1 1 342 0.837012663217391 0.785838816676094 0.704310771041786 0.823883302650204 0.766638424254586 "YES" 254 3 2 9 "hypothetical protein" "SP0430" 7640 5220 100 12974 12632 4200 378 440 319 100 100 0 18645 17862 6405 412 495 388 100 100 0 0.691 0.702 0.690 0.711 1.236 0.687 0.938 80 560 30829 29704 -0.534 12596 18233 12254 17450 1010561 1428956 38.219 44.760 0 0 9 2 16 9 1 3 ORF00383 TIGR4 8819 1 1 347 0.476029424101413 0.501052542512823 0.485488943075756 0.486529093176325 0.491306527484049 "YES" 255 3 3 9 "DNA-binding response regulator" "SP0387" 7910 5220 120 40466 38761 18660 370 441 916 99 98 5 7611 7510 3686 394 420 193 95 95 0 5.556 5.395 5.431 5.730 1.666 5.468 0.939 120 814 47313 45507 2.474 40096 7217 38391 7116 4651262 901161 41.834 36.736 0 0 9 3 17 9 1 3 ORF00332 TIGR4 8776 1 0 350 3.82752457352743 3.85068157671892 3.82129050702092 3.92097286061933 3.91042808192544 "YES" 256 3 4 9 "SPFH domain/Band 7 family" "SP2156" 8150 5220 110 40802 41621 16450 376 737 2105 100 100 12 16785 18545 7669 395 550 1343 100 100 0 2.467 2.272 2.282 2.279 1.216 2.296 0.940 80 656 56816 59395 1.302 40426 16390 41245 18150 3329701 1483594 19.422 13.399 0 0 9 4 18 9 1 3 ORF02495 TIGR4 10529 1 1 356 1.69951460095251 1.62164013759136 1.60563154796939 1.55949339430217 1.64197931164975 "YES" 257 3 5 9 "cytidine and deoxycytidylate deaminase family protein" "SP0744" 8410 5220 100 8520 8492 2739 350 426 412 100 100 0 6141 5957 2021 399 450 261 100 98 0 1.423 1.465 1.467 1.510 1.453 1.463 0.918 80 560 13912 13700 0.509 8170 5742 8142 5558 679392 476529 19.578 21.100 0 0 9 5 19 9 1 3 ORF00771 TIGR4 9129 1 1 382 0.980303719965718 1.04564383871978 1.03219170940889 1.03327557059951 1.04626120772804 "YES" 258 3 6 9 "exonuclease RexB" "SP1151" 8680 5220 100 6655 6821 1988 350 386 215 100 100 0 6907 7225 2424 395 426 200 100 100 0 0.968 0.947 0.924 0.971 1.349 0.918 0.916 80 560 12817 13301 -0.047 6305 6512 6471 6830 545719 578005 29.930 33.995 0 0 9 6 20 9 1 3 ORF01254 TIGR4 9533 1 1 388 0.666854533328753 0.675921307349919 0.650133019423187 0.664444092087498 0.656505665546371 "YES" 259 3 7 9 "amino acid ABC transporter, permease protein" "SP0608" 8950 5220 110 2614 2673 707 357 387 204 100 100 0 2446 2596 893 389 407 146 100 100 0 1.097 1.049 1.036 1.094 1.578 1.004 0.746 80 650 4314 4523 0.134 2257 2057 2316 2207 213870 207698 11.206 14.993 0 0 9 7 21 9 1 3 ORF00607 TIGR4 8994 1 1 394 0.755722544485167 0.748723813526996 0.728937021777513 0.74861157234163 0.718008374954854 "YES" 260 3 1 10 "membrane protein" "SP2017" 7390 5480 100 3687 3818 938 375 396 205 100 100 0 2552 2579 819 400 418 162 100 100 0 1.539 1.580 1.748 1.644 1.457 1.566 0.779 80 560 5464 5622 0.622 3312 2152 3443 2179 305461 206334 16.693 13.340 0 0 10 1 15 10 1 3 ORF02305 TIGR4 10392 1 1 399 1.06021604007536 1.12772509568413 1.22990532245858 1.1249702238845 1.11992142946146 "YES" 261 3 2 10 "PTS system, lactose-specific IIBC components" "SP0478" 7650 5480 100 2705 2581 885 372 403 208 100 98 0 2184 2225 715 396 418 166 100 100 0 1.305 1.208 1.234 1.184 1.682 1.195 0.692 80 560 4121 4038 0.384 2333 1788 2209 1829 206511 178027 10.471 10.886 0 0 10 2 16 10 1 3 ORF00446 TIGR4 8867 1 1 433 0.899013601233494 0.862210073155968 0.868251240225338 0.81019753350319 0.854601601664394 "YES" 262 3 3 10 "branched-chain amino acid ABC transporter, ATP-binding protein" "SP0752" 7890 5480 110 31855 29493 10318 376 603 1259 100 100 0 34776 33204 11411 405 601 1225 100 100 0 0.916 0.888 0.892 0.877 1.206 0.892 0.972 80 656 65850 61916 -0.127 31479 34371 29117 32799 2359435 2656328 22.947 26.615 0 0 10 3 17 10 1 3 ORF00782 TIGR4 9137 1 1 444 0.631031769141671 0.633810053776904 0.627617590179094 0.600120977096535 0.637911823167062 "YES" 263 3 4 10 "6-phospho-beta-glucosidase" "SP0578" 8160 5480 100 3696 3571 1006 361 393 211 100 100 0 2926 3053 946 396 414 147 100 100 0 1.318 1.208 1.213 1.216 1.596 1.179 0.792 80 560 5865 5867 0.399 3335 2530 3210 2657 285654 244223 15.062 17.952 0 0 10 4 18 10 1 3 ORF00568 TIGR4 8964 1 1 450 0.907969292280265 0.862210073155968 0.853475489783902 0.832094764138412 0.84315923712328 "YES" 264 3 5 10 "DNA-binding response regulator" "SP1633" 8420 5480 100 12353 12035 3068 371 415 285 100 100 0 6874 6892 1923 390 418 161 100 100 0 1.848 1.794 1.811 1.812 1.216 1.791 0.934 80 560 18466 18166 0.886 11982 6484 11664 6502 962791 551332 40.772 40.211 0 0 10 5 19 10 1 3 ORF01838 TIGR4 10012 1 1 459 1.27308592726398 1.28046760864388 1.27423257378289 1.23993068471941 1.28082968082086 "YES" 265 3 6 10 "IS66 family element, Orf3, degenerate" "SP0644" 8690 5480 100 2516 2535 665 358 388 208 100 100 0 2058 2053 609 384 407 164 100 98 0 1.289 1.304 1.268 1.355 1.658 1.253 0.717 80 560 3832 3846 0.366 2158 1674 2177 1669 202798 164209 10.322 10.037 0 0 10 6 20 10 1 3 ORF00652 TIGR4 9029 1 1 507 0.887991212252853 0.930730078969688 0.892173883797187 0.927210859710154 0.896080173125929 "YES" 266 3 7 10 "hypothetical protein" "SP1134" 8940 5470 160 383 412 208 326 364 205 24 9 0 398 431 203 391 412 154 17 5 0 8.143 2.150 1.317 1.201 4.499 1.304 0.034 208 1296 64 126 3.026 57 7 86 40 85739 89576 0.234 0.123 -50 0 10 7 21 10 1 3 ORF01236 TIGR4 9516 1 1 517 -1 -1 -1 -1 -1 "NO" 267 3 1 11 "exoribonuclease, VacB/Rnb family" "SP0975" 7380 5740 100 19375 18308 4939 388 448 330 100 100 0 12914 12229 3312 412 438 173 100 100 0 1.519 1.516 1.493 1.515 1.367 1.539 0.903 80 560 31489 29737 0.603 18987 12502 17920 11817 1464659 978289 54.121 68.156 0 0 11 1 15 11 1 3 ORF01050 TIGR4 9358 1 1 525 1.04643805384956 1.08204509180832 1.05048549566972 1.03669701288626 1.10061243929833 "YES" 268 3 2 11 "jag protein, putative" "SP2040" 7630 5740 100 29327 27812 8833 402 862 2555 100 100 0 35877 33716 11048 397 862 2857 100 100 0 0.815 0.823 0.828 0.824 1.254 0.815 0.957 80 560 64405 60729 -0.295 28925 35480 27410 33319 2224922 2697287 10.548 11.499 0 0 11 2 16 11 1 3 ORF02334 TIGR4 10415 1 1 536 0.561452938701377 0.587416299840531 0.582586731690908 0.56385368885695 0.582845443812955 "YES" 269 3 3 11 "toxin secretion ABC transporter, ATP-binding/permease protein" "SP1953" 7900 5740 100 5566 5411 1799 353 393 225 100 100 0 5795 5835 1928 391 427 202 100 100 0 0.965 0.929 0.962 0.934 1.500 0.917 0.853 80 560 10617 10502 -0.052 5213 5404 5058 5444 432841 466836 22.302 26.772 0 0 11 3 17 11 1 3 ORF02231 TIGR4 10329 1 1 437 0.664787835394883 0.663073806259847 0.676870091650547 0.639125419165524 0.655790517762551 "YES" 270 3 4 11 "conserved hypothetical protein" "SP2144" 8170 5740 100 1633 1706 608 333 377 228 98 96 0 922 998 382 402 426 159 88 70 0 2.500 2.304 2.432 2.657 2.503 2.511 0.409 80 560 1820 1969 1.322 1300 520 1373 596 136495 79847 5.829 3.597 0 0 11 4 18 11 1 3 ORF02477 TIGR4 10518 1 1 445 1.72224827822508 1.64448013952926 1.71117262255107 1.81815443118072 1.79573608517096 "YES" 271 3 5 11 "conserved hypothetical protein" "SP1004" 8420 5740 100 2835 3047 969 345 379 219 100 100 0 2961 3197 1444 402 420 163 100 100 0 0.973 0.967 1.094 1.054 1.765 0.864 0.670 80 560 5049 5497 -0.039 2490 2559 2702 2795 243775 255725 12.183 17.037 0 0 11 5 19 11 1 3 ORF01087 TIGR4 9387 1 1 452 0.670299029885203 0.69019630856111 0.769746237282431 0.721240034047604 0.617887685220114 "YES" 272 3 6 11 "transcriptional regulator, authentic frameshift" "SP2123" 8690 5730 110 24324 22714 6532 364 431 315 100 100 0 25099 23612 5770 398 442 240 100 100 0 0.970 0.963 0.970 0.941 1.224 0.981 0.955 80 656 48661 45564 -0.044 23960 24701 22350 23214 1817153 1888984 70.740 96.542 0 0 11 6 20 11 1 3 ORF02446 TIGR4 10497 1 1 460 0.668232331951333 0.687341308318872 0.68249894896157 0.643915438366978 0.701559975927004 "YES" 273 3 7 11 "licD2 protein" "SP1274" 8950 5730 110 10799 9945 3486 338 384 239 100 100 0 10396 9648 2958 405 425 154 100 100 0 1.047 1.039 1.024 0.991 1.417 1.055 0.925 80 656 20452 18850 0.066 10461 9991 9607 9243 795574 771823 40.004 59.890 0 0 11 7 21 11 1 3 ORF01399 TIGR4 9655 1 1 512 0.721277578920665 0.7415863129214 0.720493735810978 0.678129861234512 0.754480911929653 "YES" 274 3 1 12 "oxidoreductase, short chain dehydrogenase/reductase family" "SP1909" 7390 6000 110 29232 28273 7999 359 412 304 100 100 0 29007 27187 8663 407 455 242 100 100 0 1.010 1.042 1.012 1.092 1.412 1.023 0.949 80 656 57473 54694 0.014 28873 28600 27914 26780 2261859 2174939 91.648 110.463 0 0 12 1 15 12 1 3 ORF02179 TIGR4 10285 1 1 519 0.695788304402934 0.743727563103079 0.712050449844443 0.747242995426929 0.731596182847426 "YES" 275 3 2 12 "oxidoreductase, short chain dehydrogenase/reductase family" "SP0793" 7640 5990 110 35394 31937 10842 362 499 651 100 100 0 26631 24944 7275 409 478 341 100 100 0 1.336 1.287 1.262 1.218 1.414 1.344 0.943 80 656 61254 56110 0.418 35032 26222 31575 24535 2554978 1995520 48.292 71.748 0 0 12 2 16 12 1 3 ORF00828 TIGR4 9178 1 1 528 0.920369479883485 0.918596327940175 0.88795224081392 0.833463341053113 0.96115862145351 "YES" 276 3 3 12 "glucosamine--fructose-6-phosphate aminotransferase, isomerizing" "SP0266" 7900 5990 110 9649 9024 2609 380 423 329 100 100 0 65535 62653 9029 405 555 645 100 100 85 0.142 0.139 0.143 0.131 1.400 0.130 0.884 80 656 74399 70892 -2.813 9269 65130 8644 62248 721918 5012246 26.143 96.276 0 0 12 3 17 12 1 3 ORF00195 TIGR4 8657 1 1 537 0.0978237022031848 0.0992112584177812 0.100615824434541 0.0896417879129374 0.0929692118965449 "YES" 277 3 4 12 "conserved domain protein" "SP1175" 8170 5990 100 35712 32739 11021 351 430 382 100 100 0 30810 28793 9737 416 472 288 100 100 0 1.163 1.141 1.124 1.130 1.413 1.136 0.957 80 560 65755 60765 0.218 35361 30394 32388 28377 2619144 2303464 84.579 98.337 0 0 12 4 18 12 1 3 ORF01281 TIGR4 9557 1 1 604 0.801189899030309 0.814388819098477 0.790854452198768 0.773245956806254 0.812407882419038 "YES" 278 3 5 12 "DNA ligase, NAD-dependent" "SP1117" 8420 5990 100 26243 24771 7993 341 403 279 100 100 0 44231 40400 11795 421 498 345 100 100 0 0.591 0.611 0.617 0.585 1.393 0.610 0.953 80 560 69712 64409 -0.758 25902 43810 24430 39979 1981715 3231968 87.341 115.658 0 0 12 5 19 12 1 3 ORF01214 TIGR4 9499 1 1 625 0.40713949297241 0.436101287001901 0.434125620112669 0.400308747550141 0.436240148129941 "YES" 279 3 6 12 "DNA mismatch repair protein HexB" "SP0173" 8690 5990 110 65535 60024 14048 354 469 614 100 100 73 53280 49053 15184 402 469 346 100 100 7 1.233 1.226 1.149 1.235 1.402 1.240 0.910 80 656 118059 108321 0.302 65181 52878 59670 48651 4801956 3924254 96.995 140.416 0 0 12 6 20 12 1 3 ORF00084 TIGR4 8564 1 1 653 0.849412850820612 0.875057574246041 0.808444631295716 0.845096244828075 0.886783251936274 "YES" 280 3 7 12 "ribose-phosphate pyrophosphokinase" "SP0027" 8940 5990 100 65535 61052 14148 366 574 1301 100 100 82 65535 62378 9880 426 622 1462 100 100 85 1.001 0.980 1.001 0.929 1.387 0.975 0.873 80 560 130278 122638 0.001 65169 65109 60686 61952 4884178 4990267 46.486 42.241 0 0 12 7 21 12 1 3 ORF02626 TIGR4 10639 1 1 679 0.689588210601324 0.699475059348385 0.704310771041786 0.63570397687877 0.697269089224087 "YES" 281 3 1 13 "ABC transporter, ATP-binding protein" "SP1435" 7390 6250 100 14792 13845 4647 369 402 248 100 98 0 8722 8433 2524 413 437 175 100 100 0 1.736 1.680 1.680 1.562 1.597 1.723 0.934 80 560 22732 21496 0.796 14423 8309 13476 8020 1107636 674669 54.206 45.691 0 0 13 1 15 13 1 3 ORF01601 TIGR4 9815 1 1 943 1.1959292043995 1.19910010174009 1.18206003531489 1.06885857038174 1.23219963152113 "YES" 282 3 2 13 "rod shape-determining protein MreC" "SP2218" 7640 6250 110 25579 25358 3544 353 758 2396 100 100 0 34416 34763 5075 417 862 2915 100 100 0 0.742 0.728 0.755 0.724 1.245 0.716 0.932 80 656 59225 59351 -0.431 25226 33999 25005 34346 2028637 2781045 10.267 11.630 0 0 13 2 16 13 1 3 ORF02567 TIGR4 10590 1 1 340 0.511163288977205 0.519610044087372 0.53122340872782 0.495424843121883 0.512045813214817 "YES" 283 3 3 13 "Hypothetical protein" "NTL02SP0419" 7910 6250 100 2853 2864 689 346 379 209 100 100 0 2329 2352 665 415 446 203 100 100 0 1.310 1.300 1.344 1.329 1.494 1.238 0.730 80 560 4421 4455 0.389 2507 1914 2518 1937 229144 188155 11.890 9.389 0 0 13 3 17 13 1 3 NTORFA0419 R6 11705 1 1 100 0.902458097789944 0.92787507872745 0.945648028251908 0.909419359819037 0.885352956368635 "YES" 284 3 4 13 "Conserved hypothetical protein" "NTL02SP0970" 8170 6250 110 2045 2040 543 341 364 201 100 100 0 2077 2113 529 407 429 144 100 100 0 1.020 0.996 1.025 0.996 1.597 1.074 0.663 80 656 3374 3405 0.029 1704 1670 1699 1706 163219 169016 8.338 11.694 0 0 13 4 18 13 1 3 NTORFA0970 R6 11716 1 1 435 0.702677297515835 0.710895060317338 0.721197342974855 0.681551303521265 0.768068719822225 "YES" 285 3 5 13 "arginyl-tRNA synthetase" "SP2078" 8420 6250 110 65535 59348 14120 361 509 680 100 100 72 65535 61562 10577 422 644 1743 100 100 77 1.001 0.965 1.001 0.935 1.220 0.959 0.930 80 656 130287 120127 0.001 65174 65113 58987 61140 4747869 4924922 86.528 34.950 0 0 13 5 19 13 1 3 ORF02382 TIGR4 10453 1 1 612 0.689588210601324 0.688768808439991 0.704310771041786 0.639809707622874 0.685826724682974 "YES" 286 3 6 13 "glycosyl transferase, group 1" "SP1758" 8690 6250 100 30982 28402 8113 368 447 370 100 100 0 31983 30176 8352 415 491 338 100 100 0 0.970 0.942 0.937 0.931 1.287 0.944 0.966 80 560 62182 57795 -0.044 30614 31568 28034 29761 2272161 2414075 75.554 87.825 0 0 13 6 20 13 1 3 ORF01994 TIGR4 10136 1 1 628 0.668232331951333 0.672352557047121 0.6592799125536 0.637072553793471 0.67509950792568 "YES" 287 3 7 13 "sugar ABC transporter, sugar-binding protein" "SP1897" 8940 6250 100 5711 5585 1913 355 380 193 97 97 0 5922 5601 1543 408 429 159 100 100 0 0.971 1.007 0.981 0.965 1.480 1.042 0.873 80 560 10870 10423 -0.042 5356 5514 5230 5193 446812 448114 26.969 32.528 0 0 13 7 21 13 1 3 ORF02163 TIGR4 10273 1 1 657 0.668921231262623 0.718746310983494 0.690238627764228 0.660338361343394 0.745183990739998 "YES" 288 3 1 14 "glucokinase" "SP0668" 7390 6510 110 65535 60851 14074 341 490 665 100 100 81 65535 58311 14604 427 546 528 100 100 58 1.001 1.045 1.001 1.052 1.186 1.062 0.961 80 656 130302 118394 0.002 65194 65108 60510 57884 4868070 4664868 90.768 109.403 0 0 14 1 15 14 1 3 ORF00683 TIGR4 9053 1 1 684 0.689588210601324 0.745868813284758 0.704310771041786 0.719871457132902 0.75948694641639 "YES" 289 3 2 14 "Tn5252, relaxase" "SP1056" 7650 6520 90 1468 1503 455 341 371 195 100 96 0 1196 1180 452 421 437 152 94 86 0 1.454 1.531 1.657 1.696 2.289 1.638 0.445 52 420 1902 1921 0.540 1127 775 1162 759 78159 61373 5.805 4.888 0 0 14 2 16 14 1 3 ORF01146 TIGR4 9439 1 1 989 1.00165959861571 1.09275134271671 1.16587707054569 1.16055322366673 1.17141206989647 "YES" 290 3 3 14 "signal peptidase I" "SP0402" 7910 6510 110 36759 36103 5429 368 560 1012 100 100 0 27882 27667 2943 421 532 564 100 100 0 1.325 1.312 1.312 1.298 1.172 1.327 0.962 80 656 63852 62981 0.406 36391 27461 35735 27246 2888213 2213361 35.122 48.112 0 0 14 3 17 14 1 3 ORF00352 TIGR4 8791 1 1 402 0.912791587459295 0.936440079454165 0.923132599007815 0.888206417641166 0.949001109128578 "YES" 291 3 4 14 "Hypothetical protein" "NTL02SP1212" 8170 6510 110 4144 4095 1109 363 394 226 100 100 0 5527 5702 1531 422 459 214 100 100 0 0.741 0.707 0.714 0.703 1.349 0.677 0.863 80 656 8886 9012 -0.433 3781 5105 3732 5280 327637 456151 16.376 24.500 0 0 14 4 18 14 1 3 NTORFA1212 R6 11726 1 1 123 0.510474389665915 0.504621292815621 0.502375515008826 0.481054785517519 0.484155049645853 "YES" 292 3 5 14 "Hypothetical protein" "NTL02SP0968" 8430 6510 110 1766 1769 490 336 370 219 100 100 0 1797 1726 455 413 431 139 100 100 0 1.033 1.091 1.052 1.099 1.678 1.121 0.625 80 650 2814 2746 0.047 1430 1384 1433 1313 141517 138107 6.388 9.317 0 0 14 5 19 14 1 3 NTORFA0968 R6 11714 1 1 542 0.711632988562605 0.778701316070498 0.740194736399559 0.752033014628384 0.801680665661745 "YES" 293 3 6 14 "Empty" "Empty" 8680 6510 160 324 355 207 342 383 251 12 1 0 393 409 122 409 438 227 5 0 0 1.125 100000.000 1.578 1.528 3.704 79.119 0.000 208 1249 -34 13 0.170 -18 -16 13 0 73895 85148 -0.112 -0.128 -75 0 14 6 20 14 1 3 Empty Empty 0 0 0 0 -1 -1 -1 -1 -1 "NO" 294 3 7 14 "Empty" "Empty" 8940 6500 160 308 337 179 337 362 192 14 3 0 378 418 159 402 419 142 12 6 0 1.208 0.000 1.756 1.478 4.181 13.608 0.002 208 1267 -53 16 0.273 -29 -24 0 16 70168 86859 -0.130 -0.007 -75 0 14 7 21 14 1 3 Empty Empty 0 0 0 0 -1 -1 -1 -1 -1 "NO" 295 4 1 1 "type II restriction endonuclease, putative" "SP1037" 9630 3140 120 2093 2175 749 430 451 222 99 94 0 1748 1774 863 432 450 177 92 86 0 1.264 1.300 1.294 1.473 2.215 1.196 0.656 120 805 2979 3087 0.338 1663 1316 1745 1342 260979 212833 7.766 7.480 0 0 1 1 22 1 1 4 ORF01124 TIGR4 9420 1 0 100 0.870768729470603 0.92787507872745 0.910467670058013 1.00795689767753 0.855316749448213 "YES" 296 4 2 1 "hypothetical protein" "SP0367" 9900 3140 120 2230 2221 593 455 475 223 100 100 0 1072 1088 449 417 436 159 91 79 0 2.710 2.632 2.578 3.046 2.223 2.532 0.415 120 808 2430 2437 1.438 1775 655 1766 671 266470 130556 7.830 4.101 0 0 1 2 23 1 1 4 ORF00311 TIGR4 8756 1 0 100 1.86691713359599 1.87859015939281 1.81389926847725 2.08434264109013 1.81075418863117 "YES" 297 4 3 1 "ribosomal protein L35" "SP0960" 10150 3140 120 12481 11846 4946 438 490 310 100 100 0 21770 20298 9820 418 468 311 97 96 0 0.564 0.574 0.570 0.655 1.761 0.545 0.943 120 814 33395 31288 -0.826 12043 21352 11408 19880 1421514 2435728 36.632 63.762 0 0 1 3 24 1 1 4 ORF01035 TIGR4 9344 1 0 103 0.388539211567579 0.409692534761197 0.401056083410407 0.448208939564687 0.389755542181669 "YES" 298 4 4 1 "IS630-Spn1, transposase Orf1" "SP0299" 10410 3140 120 17888 16407 7041 471 544 406 100 100 0 11279 10514 4777 422 466 293 99 98 0 1.604 1.579 1.598 1.647 1.470 1.566 0.936 120 820 28274 26028 0.682 17417 10857 15936 10092 1968846 1261700 39.071 34.294 0 0 1 4 25 1 1 4 ORF00234 TIGR4 8690 1 0 104 1.10499449530921 1.12701134562357 1.1243642478769 1.12702308925655 1.11992142946146 "YES" 299 4 5 1 "hypothetical protein" "SP2005" 10680 3140 140 8469 7817 4483 474 534 357 99 96 0 1018 1086 449 431 458 208 83 66 0 13.620 11.211 11.184 10.554 2.132 13.139 0.551 156 1038 8582 7998 3.768 7995 587 7343 655 1219507 169405 20.401 3.019 0 0 1 5 26 1 1 4 ORF02292 TIGR4 10381 1 0 125 9.38280861977026 8.00185192893341 7.86914252081052 7.22198037887895 9.39632673160541 "YES" 300 4 6 1 "bacteriocin BlpM" "SP0539" 10930 3140 130 2226 2246 588 475 498 232 100 99 0 990 1070 448 427 452 157 89 78 0 3.110 2.754 2.910 3.350 2.402 2.945 0.429 120 892 2314 2414 1.637 1751 563 1771 643 269485 128385 7.534 3.936 0 0 1 6 27 1 1 4 ORF00519 TIGR4 8927 0 0 134 2.142476858112 1.96566766678107 2.04749684688471 2.29236633212474 2.10611022334865 "YES" 301 4 7 1 "hypothetical protein" "SP0142" 11190 3140 120 5408 5253 1840 482 513 246 100 100 0 2915 2913 1253 431 449 162 97 96 0 1.983 1.922 2.037 2.176 1.748 1.869 0.848 120 820 7410 7253 0.988 4926 2484 4771 2482 630372 349554 19.268 15.210 0 0 1 7 28 1 1 4 ORF00046 TIGR4 8533 1 1 145 1.36608733428814 1.37182761639551 1.4332477928193 1.48901168319505 1.33661120795879 "YES" 302 4 1 2 "hypothetical protein" "SP0125" 9640 3400 160 1635 1649 584 431 455 219 96 90 0 767 840 370 424 455 345 48 22 0 3.510 2.928 2.988 3.382 2.625 2.472 0.162 208 1202 1547 1634 1.812 1204 343 1218 416 342965 174660 5.452 1.116 0 0 2 1 22 2 1 4 ORF00028 TIGR4 8517 1 0 159 2.41803658262802 2.08986017731844 2.10237820566719 2.31426356275996 1.76784532160199 "YES" 303 4 2 2 "hypothetical protein" "SP1455" 9890 3400 140 3078 2993 1246 428 456 226 99 98 0 1666 1786 987 418 435 154 90 83 0 2.123 1.875 2.020 2.226 2.073 1.721 0.733 156 990 3898 3933 1.086 2650 1248 2565 1368 466890 278612 11.226 8.773 0 0 2 2 23 2 1 4 ORF01626 TIGR4 9835 1 0 100 1.46253323786874 1.33828136354921 1.42128647103337 1.52322610606259 1.23076933595349 "YES" 304 4 3 2 "hypothetical protein" "SP0147" 10150 3400 120 2558 2584 837 428 467 252 100 99 0 1507 1502 539 421 455 222 95 88 0 1.961 1.994 2.104 2.171 1.905 2.086 0.664 120 814 3216 3237 0.972 2130 1086 2156 1081 310041 180272 8.401 4.716 0 0 2 3 24 2 1 4 ORF00053 TIGR4 8538 1 0 101 1.35093154943976 1.4232176207558 1.48038947279912 1.4855902409083 1.49179827704764 "YES" 305 4 4 2 "hypothetical protein" "SP1209" 10420 3400 130 2313 2359 697 436 473 229 100 100 0 1166 1269 742 417 443 198 91 73 0 2.506 2.257 2.483 2.708 2.169 2.114 0.409 120 908 2626 2775 1.325 1877 749 1923 852 283041 152329 8.236 4.172 0 0 2 4 25 2 1 4 ORF01323 TIGR4 9591 1 0 103 1.72638167409282 1.61093388668296 1.74705658790885 1.85305314250561 1.51182241499458 "YES" 306 4 5 2 "hypothetical protein" "SP0003" 10670 3400 140 2814 2760 1016 465 492 237 99 98 0 1990 2076 1097 426 441 154 92 88 0 1.502 1.391 1.466 1.624 2.108 1.275 0.702 156 1000 3913 3945 0.587 2349 1564 2295 1650 430525 323904 9.570 10.617 0 0 2 5 26 2 1 4 ORF02594 TIGR4 10615 1 0 105 1.03472676555763 0.992826334238371 1.03148810224501 1.11128445473748 0.91181342436996 "YES" 307 4 6 2 "IS3-Spn1, hypothetical protein, authentic point mutation" "SP0393" 10930 3400 150 2288 2273 662 481 511 249 100 99 0 1186 1278 596 424 450 183 89 78 0 2.371 2.098 2.337 2.485 2.210 2.103 0.503 156 1106 2569 2646 1.246 1807 762 1792 854 354634 199443 7.076 4.525 0 0 2 6 27 2 1 4 ORF00342 TIGR4 8782 1 0 128 1.63338026706867 1.49744762705399 1.64432994198267 1.70045681651641 1.50395578937257 "YES" 308 4 7 2 "hypothetical protein" "SP0997" 11190 3400 120 2754 2671 792 454 509 766 98 80 0 1358 1397 790 412 436 161 89 85 0 2.431 2.251 2.396 2.781 2.276 3.867 0.281 120 814 3246 3202 1.282 2300 946 2217 985 320539 167614 2.822 5.969 0 0 2 7 28 2 1 4 ORF01079 TIGR4 9380 1 0 138 1.67471422574607 1.60665138631961 1.68584276465147 1.90300619989221 2.7654764800303 "YES" 309 4 1 3 "hypothetical protein" "SP0772" 9630 3660 130 2425 2443 874 429 453 232 96 95 0 1225 1255 535 410 450 349 81 58 0 2.449 2.383 2.496 2.714 2.034 2.447 0.459 120 908 2811 2859 1.292 1996 815 2014 845 293104 150651 8.578 2.307 0 0 3 1 22 3 1 4 ORF00803 TIGR4 9157 1 0 146 1.68711441334929 1.70086639431347 1.75620348103926 1.85715887324971 1.7499666270065 "YES" 310 4 2 3 "hypothetical protein" "SP1146" 9900 3660 130 3917 3870 1362 412 435 227 100 98 0 3921 3976 1731 410 437 245 98 95 0 0.998 0.970 0.984 1.047 1.760 0.915 0.826 120 913 7016 7024 -0.002 3505 3511 3458 3566 464459 477161 15.132 14.445 0 0 3 2 23 3 1 4 ORF01249 TIGR4 9528 1 0 162 0.687521512667454 0.692337558742789 0.692349449255861 0.716450014846149 0.654360222194912 "YES" 311 4 3 3 "conserved hypothetical protein" "SP0783" 10150 3660 110 12371 12262 1962 430 517 416 100 100 0 3788 3860 773 407 448 226 100 100 0 3.532 3.427 3.545 3.457 1.311 3.526 0.874 80 656 15322 15285 1.820 11941 3381 11832 3453 980977 308805 28.233 15.097 0 0 3 3 24 3 1 4 ORF00816 TIGR4 9168 1 0 252 2.4331923674764 2.44602145753767 2.49428739594718 2.36558519706126 2.52161108574783 "YES" 312 4 4 3 "conserved hypothetical protein" "SP0471" 10410 3660 110 4604 4737 1044 443 490 264 100 100 0 2918 2938 872 407 434 161 100 100 0 1.657 1.697 1.750 1.751 1.435 1.692 0.775 80 656 6672 6825 0.729 4161 2511 4294 2531 378996 235054 16.087 15.553 0 0 3 4 25 3 1 4 ORF00439 TIGR4 8860 1 1 253 1.14150615880759 1.2112338527696 1.23131253678634 1.19818908882102 1.21003005022272 "YES" 313 4 5 3 "preprotein translocase, YajC subunit" "SP2029" 10680 3660 120 17011 15546 5938 448 479 241 100 100 0 13256 12169 5080 416 439 180 99 99 0 1.290 1.285 1.283 1.367 1.529 1.263 0.950 120 808 29403 26851 0.367 16563 12840 15098 11753 1865497 1460229 62.519 65.167 0 0 3 5 26 3 1 4 ORF02321 TIGR4 10404 1 1 254 0.888680111564144 0.917168827819056 0.902727991255356 0.935422321198363 0.903231650964125 "YES" 314 4 6 3 "conserved hypothetical protein" "SP1106" 10930 3660 120 20276 18379 6949 475 524 284 100 99 0 22955 20822 8546 430 465 232 99 99 0 0.879 0.878 0.869 0.952 1.670 0.858 0.953 120 808 42326 38296 -0.186 19801 22525 17904 20392 2205439 2498689 62.870 87.746 0 0 3 6 27 3 1 4 ORF01202 TIGR4 9488 1 1 256 0.60554249462394 0.626672553171308 0.611434625409902 0.651442611397836 0.613596798517196 "YES" 315 4 7 3 "ribosomal protein L22" "SP0214" 11190 3660 120 16424 14903 5959 464 509 290 100 100 0 18163 16522 6862 417 456 238 99 97 0 0.899 0.897 0.913 0.955 1.662 0.883 0.948 120 820 33706 30544 -0.153 15960 17746 14439 16105 1788359 1982649 49.634 67.504 0 0 3 7 28 3 1 4 ORF00130 TIGR4 8605 1 1 266 0.61932048084974 0.64023380432194 0.64239334062053 0.653495476769888 0.631475493112686 "YES" 316 4 1 4 "ABC transporter, substrate-binding protein" "SP1690" 9640 3920 120 2900 2871 771 421 451 225 100 100 0 1199 1275 521 407 435 320 85 64 0 3.130 2.823 3.086 3.317 2.120 2.991 0.500 120 814 3271 3318 1.646 2479 792 2450 868 344531 152943 10.756 2.625 0 0 4 1 22 4 1 4 ORF01909 TIGR4 10069 1 1 268 2.15625484433781 2.01491642095968 2.17133170772722 2.26978481303216 2.13900702140435 "YES" 317 4 2 4 "phospho-2-dehydro-3-deoxyheptonate aldolase" "SP1700" 9890 3920 120 12048 10644 4267 403 441 249 100 100 0 12371 10988 5038 405 429 165 98 98 0 0.973 0.968 0.996 1.114 1.984 0.938 0.923 120 814 23611 20824 -0.039 11645 11966 10241 10583 1277260 1318517 40.976 63.994 0 0 4 2 23 4 1 4 ORF01923 TIGR4 10079 1 1 270 0.670299029885203 0.69091005862167 0.700792735222396 0.762297341488644 0.670808621222762 "YES" 318 4 3 4 "ribosome-binding factor A" "SP0557" 10150 3920 120 5283 4888 1957 400 440 244 99 98 0 5083 4850 2433 403 434 227 96 95 0 1.043 1.009 1.026 1.153 1.853 0.939 0.866 120 820 9563 8935 0.061 4883 4680 4488 4447 586531 581949 18.230 19.454 0 0 4 3 24 4 1 4 ORF00540 TIGR4 8943 1 1 273 0.718521981675505 0.720173811104613 0.721900950138733 0.78898459132532 0.671523769006582 "YES" 319 4 4 4 "DNA-binding response regulator" "SP0661" 10410 3920 100 8194 8173 1373 455 514 333 100 100 0 4221 4149 885 419 455 271 100 100 0 2.036 2.069 2.068 2.096 1.350 2.102 0.857 80 560 11541 11448 1.025 7739 3802 7718 3730 653849 331930 23.000 13.631 0 0 4 4 25 4 1 4 ORF00675 TIGR4 9046 1 1 252 1.40259899778651 1.47674887529776 1.45505961489951 1.434268606607 1.50324064158875 "YES" 320 4 5 4 "acylphosphatase" "SP1974" 10670 3920 120 2993 2938 921 407 438 222 98 97 0 1407 1410 520 411 429 157 95 90 0 2.596 2.534 2.616 2.696 1.827 2.603 0.694 120 820 3582 3530 1.377 2586 996 2531 999 352587 169231 11.261 6.248 0 0 4 5 26 4 1 4 ORF02256 TIGR4 10350 1 1 253 1.78838261210893 1.80864265345797 1.84063634070461 1.8448416810174 1.86152968128236 "YES" 321 4 6 4 "sodium:solute symporter family protein" "SP1328" 10930 3920 120 1995 1985 532 441 461 206 100 98 0 907 1029 417 420 439 147 93 78 0 3.191 2.535 2.909 2.893 2.232 2.731 0.434 120 820 2041 2153 1.674 1554 487 1544 609 238193 123458 7.398 4.014 0 0 4 6 27 4 1 4 ORF01464 TIGR4 9709 1 1 255 2.1982777023265 1.80935640351853 2.04679323972083 1.97964650711548 1.95306859761126 "YES" 322 4 7 4 "transcriptional regulator, GntR family" "SP1714" 11190 3920 100 16202 16243 3684 484 558 405 100 100 0 2332 2446 754 425 453 222 100 100 0 8.242 7.798 8.580 8.121 1.417 8.104 0.805 80 560 17625 17780 3.043 15718 1907 15759 2021 1299463 195691 38.728 8.977 0 0 4 7 28 4 1 4 ORF01937 TIGR4 10093 1 1 257 5.67790812365246 5.56582297224358 6.03694946607245 5.55710656214477 5.79555764007385 "YES" 323 4 1 5 "conserved hypothetical protein" "SP2209" 9630 4180 110 11463 11516 1689 416 492 399 100 100 0 7278 7157 1471 415 452 216 100 100 0 1.610 1.646 1.620 1.673 1.295 1.662 0.915 80 656 17910 17842 0.687 11047 6863 11100 6742 921260 572569 27.629 31.042 0 0 5 1 22 5 1 4 ORF02556 TIGR4 10581 1 1 267 1.10912789117695 1.17483259968106 1.13984360548221 1.14481458914767 1.18857561670814 "YES" 324 4 2 5 "conserved hypothetical protein" "SP1750" 9880 4180 110 18692 17439 4440 421 651 1287 100 100 0 14376 13539 3724 415 555 889 100 100 0 1.309 1.297 1.307 1.302 1.280 1.292 0.929 80 656 32232 30142 0.388 18271 13961 17018 13124 1395109 1083102 13.044 14.605 0 0 5 2 23 5 1 4 ORF01983 TIGR4 10128 1 1 268 0.901769198478654 0.925733828545771 0.919614563188425 0.890943571470569 0.923970936694892 "YES" 325 4 3 5 "transcription-repair coupling factor" "SP0006" 10140 4180 110 7465 7438 2130 412 512 538 100 100 0 10714 10454 2729 413 511 585 100 100 0 0.685 0.700 0.703 0.690 1.310 0.685 0.893 80 656 17354 17067 -0.546 7053 10301 7026 10041 595007 836311 12.874 16.997 0 0 5 3 24 5 1 4 ORF02597 TIGR4 10618 1 1 271 0.471896028233673 0.499625042391704 0.494635836206169 0.472159035571961 0.48987623191641 "YES" 326 4 4 5 "ribosomal protein L13" "SP0294" 10420 4180 120 17933 16286 6673 416 455 239 100 100 0 31191 28081 13264 398 426 170 100 97 0 0.569 0.573 0.565 0.659 1.906 0.547 0.952 120 820 48310 43553 -0.814 17517 30793 15870 27683 1954369 3369744 66.238 162.676 0 0 5 4 25 5 1 4 ORF00229 TIGR4 8685 1 1 274 0.391983708124029 0.408978784700637 0.397538047591018 0.45094609339409 0.391185837749308 "YES" 327 4 5 5 "autoinducer-2 production protein" "SP0340" 10680 4180 110 10086 9979 1575 426 475 306 100 100 0 9136 9049 1838 404 433 181 100 100 0 1.106 1.105 1.099 1.120 1.234 1.067 0.933 80 656 18392 18198 0.146 9660 8732 9553